RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 KAT2AQ92830 837 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 ADAD1Q96M93 576 aaKnown RBP6.13□□□□□ -1.43
CCDC39-202ENST00000471307 TMEM204Q9BSN7 226 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 OSBPL5Q9H0X9 879 aaPredicted RBP6.13□□□□□ -1.43
CCDC39-202ENST00000471307 RNF146Q9NTX7 359 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 WWOXQ9NZC7 414 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 SELENONQ9NZV5 590 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 ARID4BQ4LE39 1312 aaPredicted RBP6.13□□□□□ -1.43
CCDC39-202ENST00000471307 ANKRD30BQ9BXX2 1392 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 PRDM15P57071 1507 aaPredicted RBP6.13□□□□□ -1.43
CCDC39-202ENST00000471307 LMTK2Q8IWU2 1503 aa6.13□□□□□ -1.43
CCDC39-202ENST00000471307 EFCAB8A8MWE9 144 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 MSI1O43347 362 aaKnown RBP6.12□□□□□ -1.43
CCDC39-202ENST00000471307 NEURL1O76050 574 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 CHRNA5P30532 468 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 RASSF2P50749 326 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 PMPCAQ10713 525 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 ALG10Q5BKT4 473 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 ALG10BQ5I7T1 473 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 ATPAF1Q5TC12 328 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-202ENST00000471307 PARM1Q6UWI2 310 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 KLBQ86Z14 1044 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 ADAMTS15Q8TE58 950 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 MAGED2Q9UNF1 606 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-202ENST00000471307 DTX4Q9Y2E6 619 aa6.12□□□□□ -1.43
CCDC39-202ENST00000471307 TET3O43151 1660 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 MROH1Q8NDA8 1641 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 ARHGAP31Q2M1Z3 1444 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM90A18PA6NE21 464 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM90A16PA6NEW6 464 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 AQP12BA6NM10 295 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM90A9PA6NNJ1 464 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM90A5PA8MXJ8 464 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 LACTBL1A8MY62 500 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 IFIT2P09913 472 aaKnown RBP6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM90A15PP0C7V4 464 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM90A14PP0C7W9 464 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 RFX2P48378 723 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 FAM3BP58499 235 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-202ENST00000471307 Q5PR19 223 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 UBAP2Q5T6F2 1119 aaKnown RBP6.11□□□□□ -1.43
CCDC39-202ENST00000471307 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 ADHFE1Q8IWW8 467 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 ENDOVQ8N8Q3 282 aaKnown RBP6.11□□□□□ -1.43
CCDC39-202ENST00000471307 ZNF527Q8NB42 609 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 HMGB4Q8WW32 186 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 SIN3AQ96ST3 1273 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 MECRQ9BV79 373 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 KATNAL1Q9BW62 490 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 SF3B5Q9BWJ5 86 aaKnown RBP6.11□□□□□ -1.43
CCDC39-202ENST00000471307 MAP6D1Q9H9H5 199 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 CHST12Q9NRB3 414 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 CDC23Q9UJX2 597 aa6.11□□□□□ -1.43
CCDC39-202ENST00000471307 RPRD2Q5VT52 1461 aaKnown RBP6.1□□□□□ -1.43
CCDC39-202ENST00000471307 H0YGN5 161 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 TNFRSF13BO14836 293 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-202ENST00000471307 ITGA2BP08514 1039 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 ARRB2P32121 409 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 GPR162Q16538 588 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 ODF3L2Q3SX64 289 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 FAM185AQ8N0U4 392 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 STYXQ8WUJ0 223 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 ASB5Q8WWX0 329 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 NTPCRQ9BSD7 190 aaKnown RBP6.1□□□□□ -1.43
CCDC39-202ENST00000471307 RTKNQ9BST9 563 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 SIRT3Q9NTG7 399 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-202ENST00000471307 LRCH1Q9Y2L9 728 aa6.1□□□□□ -1.43
CCDC39-202ENST00000471307 ZC3H13Q5T200 1668 aaKnown RBP6.1□□□□□ -1.43
CCDC39-202ENST00000471307 ABCC3O15438 1527 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 PTPRTO14522 1441 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 CNTLNQ9NXG0 1405 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 SIGLEC1Q9BZZ2 1709 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 RPS10-NUDT3A0A1W2PQS6 291 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 CXorf65A6NEN9 183 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 SKAP2O75563 359 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-202ENST00000471307 PCP4P48539 62 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 RNASELQ05823 741 aaKnown RBP6.09□□□□□ -1.43
CCDC39-202ENST00000471307 VWA5B1Q5TIE3 1220 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 HMBOX1Q6NT76 420 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 XRRA1Q6P2D8 792 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 NFRKBQ6P4R8 1299 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 RAB11FIP2Q7L804 512 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 IGFN1Q86VF2 1251 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 SLC25A41Q8N5S1 370 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 INPP5DQ92835 1189 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 ZPBPQ9BS86 351 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 POLR3GLQ9BT43 218 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 SORBS1Q9BX66 1292 aaKnown RBP6.09□□□□□ -1.43
CCDC39-202ENST00000471307 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-202ENST00000471307 ARHGAP39Q9C0H5 1083 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 PNRC2Q9NPJ4 139 aaKnown RBP6.09□□□□□ -1.43
CCDC39-202ENST00000471307 PLK2Q9NYY3 685 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 TBC1D14Q9P2M4 693 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 HERC5Q9UII4 1024 aaKnown RBP6.09□□□□□ -1.43
CCDC39-202ENST00000471307 PCDHA7Q9UN72 937 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 LRP12Q9Y561 859 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 EVPLQ92817 2033 aa6.09□□□□□ -1.43
CCDC39-202ENST00000471307 EFCAB6Q5THR3 1501 aa6.09□□□□□ -1.44
CCDC39-202ENST00000471307 CEP152O94986 1710 aa6.08□□□□□ -1.44
CCDC39-202ENST00000471307 E9PCH4 1651 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms