RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 DUSP12Q9UNI6 340 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 NEU2Q9Y3R4 380 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 COL4A2P08572 1712 aa11.51□□□□□ -0.57
SREBF1-209ENST00000470247 PRRT4C9JH25 899 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 H7C0C1 242 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CCDC188H7C350 402 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 MCF2LO15068 1137 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 ITGAVP06756 1048 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CCNCP24863 283 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 RBL1P28749 1068 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CTHP32929 405 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 EIF2DP41214 584 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 PTGIRP43119 386 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CTSOP43234 321 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 ATP5OP48047 213 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 DGKGP49619 791 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 GALK1P51570 392 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 NRLP54845 237 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 GDF10P55107 478 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 OXCT1P55809 520 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF33AQ06730 810 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CKAP4Q07065 602 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 C2orf54Q08AI8 447 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 WASHC5Q12768 1159 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 BYSLQ13895 437 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 SLC45A4Q5BKX6 768 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 RNF135Q8IUD6 432 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF557Q8N988 423 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 DCAF4L2Q8NA75 395 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 CSGALNACT1Q8TDX6 532 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 TFB1MQ8WVM0 346 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 FATE1Q969F0 183 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 TMEM121Q9BTD3 319 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 SPON2Q9BUD6 331 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 MUC3BQ9H195 1237 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 ATP13A1Q9HD20 1204 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 HEBP1Q9NRV9 189 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 DEC1Q9P2X7 70 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 VPS51Q9UID3 782 aa11.5□□□□□ -0.57
SREBF1-209ENST00000470247 NYNRINQ9P2P1 1898 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
SREBF1-209ENST00000470247 SPECC1L-ADORA2AF8WAN1 911 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 KCNK1O00180 336 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 PPP1R12AO14974 1030 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-209ENST00000470247 MATN3O15232 486 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 MT-CO1P00395 513 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 CHRNA3P32297 505 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 ETFBP38117 255 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 FNTAP49354 379 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 IL10RBQ08334 325 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 DMC1Q14565 340 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 SLC44A4Q53GD3 710 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 MBLAC2Q68D91 279 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 IL31Q6EBC2 164 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 DARS2Q6PI48 645 aaKnown RBP11.49□□□□□ -0.57
SREBF1-209ENST00000470247 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
SREBF1-209ENST00000470247 PRUNE1Q86TP1 453 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 KLHL7Q8IXQ5 586 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 MMGT1Q8N4V1 131 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 ATPAF2Q8N5M1 289 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 ALLCQ8N6M5 410 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 CNTD1Q8N815 330 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 CEP112Q8N8E3 955 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 TERB1Q8NA31 727 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 GLIS1Q8NBF1 620 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 CCNYQ8ND76 341 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 ATL2Q8NHH9 583 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 WFIKKN2Q8TEU8 576 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 SLCO2A1Q92959 643 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 RTP4Q96DX8 246 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 MYO19Q96H55 970 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 PNKPQ96T60 521 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 KRT12Q99456 494 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 IL12RB2Q99665 862 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 C8orf33Q9H7E9 229 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-209ENST00000470247 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
SREBF1-209ENST00000470247 TICRRQ7Z2Z1 1910 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 GOLGA6L10A0A0M3HER8 536 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CXorf51AA0A1B0GTR3 108 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CTAGE15A4D2H0 777 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CBX4O00257 560 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ZNF821O75541 412 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 KAT7O95251 611 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CTAGE8P0CG41 777 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 ETS1P14921 441 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 GLULP15104 373 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 PTPN3P26045 913 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 STIP1P31948 543 aaKnown RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CD68P34810 354 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 VASPP50552 380 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-209ENST00000470247 CLCN6P51797 869 aa11.48□□□□□ -0.57
SREBF1-209ENST00000470247 IFI35P80217 286 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms