RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 FAM131CQ96AQ9 280 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 INTS4Q96HW7 963 aaKnown RBP19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 PPM1HQ9ULR3 514 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 NAALADL1Q9UQQ1 740 aa19.51■□□□□ 0.71
NCKIPSD-209ENST00000470006 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 GABBR2O75899 941 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 FBXO21O94952 628 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 TNFSF15O95150 251 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 PCDH8O95206 1070 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 EPB41P11171 864 aaKnown RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 HNRNPA2B1P22626 353 aaKnown RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 HNRNPKP61978 463 aaKnown RBP eCLIP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 SRSF1Q07955 248 aaKnown RBP eCLIP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 CCDC15Q0P6D6 951 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 ZNF177Q13360 481 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 DLG2Q15700 870 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 ZC3H12AQ5D1E8 599 aaKnown RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 DCAF17Q5H9S7 520 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 CRTC1Q6UUV9 634 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 Q6ZVU0 165 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 CIR1Q86X95 450 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 EXD3Q8N9H8 876 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 SLC35F5Q8WV83 523 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 GRAMD1AQ96CP6 724 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 NOX5Q96PH1 765 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 CCNL2Q96S94 520 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 SYNDIG1Q9H7V2 258 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 DYRK4Q9NR20 520 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 SSUH2Q9Y2M2 353 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 FARP1Q9Y4F1 1045 aaPredicted RBP19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 ENTPD2Q9Y5L3 495 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 BOD1L1Q8NFC6 3051 aa19.5■□□□□ 0.71
NCKIPSD-209ENST00000470006 LY6G6EA0A0G2JKS1 128 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 A0A1W2PNU3 283 aaPredicted RBP19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 KPNA3O00505 521 aaPredicted RBP19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 MCF2LO15068 1137 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 TAS2R38P59533 333 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 NFKB2Q00653 900 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 CLN3Q13286 438 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 ARL13BQ3SXY8 428 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 COLEC12Q5KU26 742 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 OR6B2Q6IFH4 312 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 ZCCHC8Q6NZY4 707 aaKnown RBP19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 GUSBP11Q6P575 273 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 TMEM270Q6UE05 265 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 ATG14Q6ZNE5 492 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 Q6ZSR6 202 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 HORMAD1Q86X24 394 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 CCAR2Q8N163 923 aaKnown RBP19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 ERCC4Q92889 916 aaPredicted RBP19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 SLC39A13Q96H72 371 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 PPP1R9BQ96SB3 815 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 ST7Q9NRC1 585 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 SLC12A6Q9UHW9 1150 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 IPO11Q9UI26 975 aaKnown RBP19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 PCDHGA8Q9Y5G5 932 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 U3KQA8 63 aa19.49■□□□□ 0.71
NCKIPSD-209ENST00000470006 PMS2P1A4D2B8 440 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 H3BM21 787 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 ALOX15BO15296 676 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 OXCT1P55809 520 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 SKOR1P84550 965 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 NNTQ13423 1086 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 ZNF284Q2VY69 593 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 NEK5Q6P3R8 708 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 USP53Q70EK8 1073 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 TAC4Q86UU9 113 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 TPCN2Q8NHX9 752 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 WDR36Q8NI36 951 aaKnown RBP19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 TFAP2BQ92481 460 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 IFT43Q96FT9 208 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 BTN2A3PQ96KV6 586 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 HSFY1Q96LI6 401 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 NCKIPSDQ9NZQ3 722 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 PCDHB4Q9Y5E5 795 aa19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 UBR5O95071 2799 aaPredicted RBP19.48■□□□□ 0.71
NCKIPSD-209ENST00000470006 A6NNZ2 444 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 ATP9BO43861 1147 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 GJB6O95452 261 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 MYL1P05976 194 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 FYNP06241 537 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 CBWD6Q4V339 395 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 CBWD3Q5JTY5 395 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 RABGAP1LQ5R372 815 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 CBWD5Q5RIA9 395 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 PIP5KL1Q5T9C9 394 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 GCNT7Q6ZNI0 430 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 DCP2Q8IU60 420 aaKnown RBP19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 SLC22A18ASQ8N1D0 253 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 ATP6V0D2Q8N8Y2 350 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 ZNF548Q8NEK5 533 aaPredicted RBP19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 PRR11Q96HE9 360 aaPredicted RBP19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 VPS28Q9UK41 221 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 DOPEY2Q9Y3R5 2298 aa19.47■□□□□ 0.71
NCKIPSD-209ENST00000470006 RP1P56715 2156 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 A0A1B0GVL5 298 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 CDRT15L2A8MXV6 281 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 MUSKO15146 869 aa19.46■□□□□ 0.71
NCKIPSD-209ENST00000470006 CETN3O15182 167 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms