RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CASC4Q6P4E1 433 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 CYP4X1Q8N118 509 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 RIBC1Q8N443 379 aaPredicted RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 SLC22A17Q8WUG5 538 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 MRPS31Q92665 395 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 ARHGEF2Q92974 986 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 AZIN2Q96A70 460 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 ZFRQ96KR1 1074 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 EBNA1BP2Q99848 306 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 TRIM56Q9BRZ2 755 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 RBM22Q9NW64 420 aaKnown RBP eCLIP18.51■□□□□ 0.555e-24■■■■■ 66.5
SMC4-211ENST00000469858 EURLQ9NYK6 297 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 FOXO6A8MYZ6 492 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 SCAMP3O14828 347 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 CCL16O15467 120 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 HLA-DQB2P05538 268 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 MGAT1P26572 445 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 NUMBP49757 651 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 GEMIN4P57678 1058 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 C5orf22Q49AR2 442 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 C9orf50Q5SZB4 431 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 EMC10Q5UCC4 262 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 KCTD11Q693B1 232 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 FAM109BQ6ICB4 259 aaPredicted RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 TDRPQ86YL5 185 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 TTC16Q8NEE8 873 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 OR52K1Q8NGK4 314 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 MAML1Q92585 1016 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 OXNAD1Q96HP4 312 aaPredicted RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 SELENOSQ9BQE4 189 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 CAPS2Q9BXY5 557 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 LRRC3Q9BY71 257 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 PSD3Q9NYI0 1048 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 CHD5Q8TDI0 1954 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 MYO7AQ13402 2215 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 ERI2A8K979 691 aaKnown RBP18.5■□□□□ 0.55
SMC4-211ENST00000469858 LPXNO60711 386 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 SUN1O94901 812 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 OLFM2O95897 454 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 IRS1P35568 1242 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 MMP13P45452 471 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 CLCN4P51793 760 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 UBE3AQ05086 875 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PARP15Q460N3 678 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PPM1LQ5SGD2 360 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 ADGRF1Q5T601 910 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 UNC5AQ6ZN44 842 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 TAOK1Q7L7X3 1001 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 EXOC3L1Q86VI1 746 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 MAB21L3Q8N8X9 362 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 SPATA22Q8NHS9 363 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PABPC5Q96DU9 382 aaKnown RBP18.5■□□□□ 0.55
SMC4-211ENST00000469858 STAMBPL1Q96FJ0 436 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 CORO1BQ9BR76 489 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 ATXN3LQ9H3M9 355 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PPCSQ9HAB8 311 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PLAC1Q9HBJ0 212 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 GLOD4Q9HC38 313 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 SLC24A2Q9UI40 661 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 CPQQ9Y646 472 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 SDR42E2A6NKP2 422 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 C5orf67F2Z3F1 127 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 GRM6O15303 877 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 TSPAN3O60637 253 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PEX11BO96011 259 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 MYL4P12829 197 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 GJA1P17302 382 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 STX2P32856 288 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 ACVRL1P37023 503 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 SGSHP51688 502 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 YBEYP58557 167 aaPredicted RBP18.5■□□□□ 0.55
SMC4-211ENST00000469858 GUCY1A3Q02108 690 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 DNAAF3Q8N9W5 541 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 CYTH2Q99418 400 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PAFAH2Q99487 392 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 APOL2Q9BQE5 337 aa18.5■□□□□ 0.55
SMC4-211ENST00000469858 PSMC3IPQ9P2W1 217 aaPredicted RBP18.5■□□□□ 0.55
SMC4-211ENST00000469858 A0A1W2PRU2 124 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 CACNG3O60359 315 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 MT-CYBP00156 380 aaPredicted RBP18.49■□□□□ 0.55
SMC4-211ENST00000469858 CKMP06732 381 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 CA3P07451 260 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 CDH4P55283 916 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 GNGT1P63211 74 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 ZXDBP98169 803 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 SERINC3Q13530 473 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 KBTBD12Q3ZCT8 623 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 GCNAQ96QF7 691 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 FCRL5Q96RD9 977 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 LRRC40Q9H9A6 602 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 ASAH2Q9NR71 780 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 SYBUQ9NX95 663 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 FETUBQ9UGM5 382 aa18.49■□□□□ 0.55
SMC4-211ENST00000469858 NRG2O14511 850 aaPredicted RBP18.48■□□□□ 0.55
SMC4-211ENST00000469858 CDC25CP30307 473 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 RENBPP51606 427 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 SLC10A7Q0GE19 358 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 CAMK1Q14012 370 aa18.48■□□□□ 0.55
SMC4-211ENST00000469858 HNRNPDQ14103 355 aaKnown RBP18.48■□□□□ 0.55
SMC4-211ENST00000469858 PRPF39Q86UA1 669 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms