RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 C11orf74Q86VG3 221 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 DEFB119Q8N690 84 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 NETO1Q8TDF5 533 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 MAIP1Q8WWC4 291 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 CPA5Q8WXQ8 436 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 PKNOX2Q96KN3 472 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 PRICKLE1Q96MT3 831 aaPredicted RBP18.13■□□□□ 0.49
MRPL28-208ENST00000469744 POPDC2Q9HBU9 364 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 THAP10Q9P2Z0 257 aaPredicted RBP18.13■□□□□ 0.49
MRPL28-208ENST00000469744 NFU1Q9UMS0 254 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 TLR6Q9Y2C9 796 aa18.13■□□□□ 0.49
MRPL28-208ENST00000469744 CKAP5Q14008 2032 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 MED19A0JLT2 244 aaPredicted RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 GOLGA6BA6NDN3 693 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 POLR3GO15318 223 aaPredicted RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 OPA1O60313 960 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 PROSCO94903 275 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 SYF2O95926 243 aaKnown RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 CALB1P05937 261 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 MMP8P22894 467 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 PRKCHP24723 683 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 PTGER3P43115 390 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 YWHAZP63104 245 aaKnown RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 FUT11Q495W5 492 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 ZC3H12AQ5D1E8 599 aaKnown RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 KIAA1324Q6UXG2 1013 aaKnown RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 LPCAT2Q7L5N7 544 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 CACUL1Q86Y37 369 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 SLC13A5Q86YT5 568 aaPredicted RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 TMEM35BQ8NCS4 154 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 CYB5D2Q8WUJ1 264 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 UCMAQ8WVF2 138 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 IFT81Q8WYA0 676 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 SLC39A13Q96H72 371 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 MRGPRX1Q96LB2 322 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 VPS45Q9NRW7 570 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 PCYOX1Q9UHG3 505 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 CYP8B1Q9UNU6 501 aa18.12■□□□□ 0.49
MRPL28-208ENST00000469744 UTP11Q9Y3A2 253 aaKnown RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 CNOT1A5YKK6 2376 aaKnown RBP18.12■□□□□ 0.49
MRPL28-208ENST00000469744 MUC22E2RYF6 1773 aaPredicted RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 SYNJ2BP-COX16A0A087WUM0 186 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 PATE3B3GLJ2 98 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 ZBTB24O43167 697 aaPredicted RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 HSF2BPO75031 334 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 TRUB2O95900 331 aaKnown RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 ERBB2P04626 1255 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 SDHBP21912 280 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 HSPA9P38646 679 aaKnown RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 RPS24P62847 133 aaKnown RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 DMTNQ08495 405 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 STARD3Q14849 445 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 EIF4HQ15056 248 aaKnown RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 PTPN20Q4JDL3 420 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 DCAF6Q58WW2 860 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 FAM183BPQ6ZVS7 135 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 CHST9Q7L1S5 443 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 GOLGA6L1Q8N7Z2 621 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 PIGKQ92643 395 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 SH3GL2Q99962 352 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 LHX5Q9H2C1 402 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 PARVAQ9NVD7 372 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 COX16Q9P0S2 106 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 AMACRQ9UHK6 382 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 GGA2Q9UJY4 613 aa18.11■□□□□ 0.49
MRPL28-208ENST00000469744 ATXN2Q99700 1313 aaKnown RBP18.11■□□□□ 0.49
MRPL28-208ENST00000469744 IGHV1OR15-9A0A0B4J2B8 117 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 ZSCAN5CA6NGD5 496 aaPredicted RBP18.1■□□□□ 0.49
MRPL28-208ENST00000469744 AGPSO00116 658 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 SLC30A4O14863 429 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 IRAK2O43187 625 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 PSTPIP1O43586 416 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 PYGMP11217 842 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 PABPC1P11940 636 aaKnown RBP18.1■□□□□ 0.49
MRPL28-208ENST00000469744 HLA-EP13747 358 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 CD70P32970 193 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 MARCKSL1P49006 195 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 RPL6Q02878 288 aaKnown RBP18.1■□□□□ 0.49
MRPL28-208ENST00000469744 ENPP2Q13822 863 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 BYSLQ13895 437 aaKnown RBP18.1■□□□□ 0.49
MRPL28-208ENST00000469744 OR6B2Q6IFH4 312 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 ADIPOR2Q86V24 386 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 DEFB106AQ8N104 65 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 ZNF366Q8N895 744 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 LRRC45Q96CN5 670 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 BTBD6Q96KE9 485 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 RTKNQ9BST9 563 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 TRIM62Q9BVG3 475 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 FAM204AQ9H8W3 233 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 PI4KAP42356 2102 aa18.1■□□□□ 0.49
MRPL28-208ENST00000469744 GOLGA8KD6RF30 607 aa18.09■□□□□ 0.49
MRPL28-208ENST00000469744 FOXD2O60548 495 aaPredicted RBP18.09■□□□□ 0.49
MRPL28-208ENST00000469744 IGLV3-25P01717 112 aa18.09■□□□□ 0.49
MRPL28-208ENST00000469744 APOEP02649 317 aa18.09■□□□□ 0.49
MRPL28-208ENST00000469744 ECHS1P30084 290 aa18.09■□□□□ 0.49
MRPL28-208ENST00000469744 FNTAP49354 379 aa18.09■□□□□ 0.49
MRPL28-208ENST00000469744 DR1Q01658 176 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms