RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 UCKL1Q9NWZ5 548 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 SLC12A6Q9UHW9 1150 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 SLC25A13Q9UJS0 675 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 OR51B4Q9Y5P0 310 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 HELZ2Q9BYK8 2649 aaKnown RBP13.45□□□□□ -0.26
PTPN7-207ENST00000468385 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 RNGTTO60942 597 aaKnown RBP13.44□□□□□ -0.26
PTPN7-207ENST00000468385 THEGLP0DJG4 465 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
PTPN7-207ENST00000468385 OXCT1P55809 520 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 CXADRP78310 365 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 DAB2P98082 770 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 CENPCQ03188 943 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 DLG2Q15700 870 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 RABGAP1LQ5R372 815 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 PIP5KL1Q5T9C9 394 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 SH2D3CQ8N5H7 860 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 OR4C6Q8NH72 309 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 SMARCE1Q969G3 411 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 DHTKD1Q96HY7 919 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-207ENST00000468385 RPRD1AQ96P16 312 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-207ENST00000468385 MED15Q96RN5 788 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 FEM1AQ9BSK4 669 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 THAP9Q9H5L6 903 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 KLHL11Q9NVR0 708 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 ATP6V1DQ9Y5K8 247 aa13.44□□□□□ -0.26
PTPN7-207ENST00000468385 SYNJ2BP-COX16A0A087WUM0 186 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 PSMA7O14818 248 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 SLC31A1O15431 190 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 LETM1O95202 739 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-207ENST00000468385 SMC2O95347 1197 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 CTSLP07711 333 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 KRT5P13647 590 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF18P17022 549 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 CCR1P32246 355 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 KCNH2Q12809 1159 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 PDCLQ13371 301 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 AUHQ13825 339 aaKnown RBP13.43□□□□□ -0.26
PTPN7-207ENST00000468385 TTI2Q6NXR4 508 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF605Q86T29 641 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF248Q8NDW4 579 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF606Q8WXB4 792 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 KLK6Q92876 244 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 COL26A1Q96A83 441 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 HIC2Q96JB3 615 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 SLC2A13Q96QE2 648 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 LGMNQ99538 433 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 MYOCQ99972 504 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 FAM204AQ9H8W3 233 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 ACP6Q9NPH0 428 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 DDIT4Q9NX09 232 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 COX16Q9P0S2 106 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 VANGL2Q9ULK5 521 aa13.43□□□□□ -0.26
PTPN7-207ENST00000468385 SETXQ7Z333 2677 aaKnown RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 A0A1W2PQU0 124 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ERVH48-1M5A8F1 160 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 RNF103O00237 685 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 FFAR2O15552 330 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 MED7O43513 233 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 BNIP3LO60238 219 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 PIAS2O75928 621 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 SLC2A3P11169 496 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 CKMT1AP12532 417 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 SRCP12931 536 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 PRLRP16471 622 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 GGCXP38435 758 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 CDK17Q00537 523 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 CFHR1Q03591 330 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF177Q13360 481 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 STIM1Q13586 685 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF284Q2VY69 593 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 C5orf22Q49AR2 442 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ISM2Q6H9L7 571 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 NEK5Q6P3R8 708 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 TMC6Q7Z403 805 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 C14orf80Q86SX3 495 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 HORMAD1Q86X24 394 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 TRIM59Q8IWR1 403 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 SLC22A18ASQ8N1D0 253 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 OR13H1Q8NG92 308 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ARRDC3Q96B67 414 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 NAF1Q96HR8 494 aaKnown RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 ZNF578Q96N58 590 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 NOX5Q96PH1 765 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 PPP1R9BQ96SB3 815 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 GTPBP4Q9BZE4 634 aaKnown RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 INTS2Q9H0H0 1204 aaKnown RBP13.42□□□□□ -0.26
PTPN7-207ENST00000468385 VPS28Q9UK41 221 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 HS3ST2Q9Y278 367 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 TBC1D30Q9Y2I9 924 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 HS3ST4Q9Y661 456 aa13.42□□□□□ -0.26
PTPN7-207ENST00000468385 LY6G6EA0A0G2JKS1 128 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 THAP12O43422 761 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 OPA1O60313 960 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms