RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CYB5D1Q6P9G0 228 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 ARHGEF18Q6ZSZ5 1173 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 TRPM8Q7Z2W7 1104 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 ALLCQ8N6M5 410 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 GBP7Q8N8V2 638 aaPredicted RBP19.06■□□□□ 0.64
CAPN3-209ENST00000466222 DEPDC1BQ8WUY9 529 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 CKAP2Q8WWK9 683 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 PLD4Q96BZ4 506 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 RPRD1AQ96P16 312 aaPredicted RBP19.06■□□□□ 0.64
CAPN3-209ENST00000466222 PPCSQ9HAB8 311 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 PDE4DIPQ5VU43 2346 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 SGK1O00141 431 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 ZFXP17010 805 aaPredicted RBP19.06■□□□□ 0.64
CAPN3-209ENST00000466222 TACR2P21452 398 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 HOXC13P31276 330 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 SNCBQ16143 134 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 SPRED3Q2MJR0 410 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 PPP1R21Q6ZMI0 780 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 PARP9Q8IXQ6 854 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 LGI2Q8N0V4 545 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 FAM161BQ96MY7 647 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 OLFM3Q96PB7 478 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 USP29Q9HBJ7 922 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 CFAP97Q9P2B7 532 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 DPP7Q9UHL4 492 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 DRG1Q9Y295 367 aaKnown RBP19.06■□□□□ 0.64
CAPN3-209ENST00000466222 USP15Q9Y4E8 981 aaPredicted RBP19.06■□□□□ 0.64
CAPN3-209ENST00000466222 TRAV19A0A0A6YYK7 116 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 SUN1O94901 812 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 ITGAVP06756 1048 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 IFNAR2P48551 515 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 RPS24P62847 133 aaKnown RBP19.05■□□□□ 0.64
CAPN3-209ENST00000466222 SLC7A9P82251 487 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 CCDC38Q502W7 563 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 ARHGAP36Q6ZRI8 547 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 CMTM8Q8IZV2 173 aa19.05■□□□□ 0.64
CAPN3-209ENST00000466222 PRICKLE1Q96MT3 831 aaPredicted RBP19.05■□□□□ 0.64
CAPN3-209ENST00000466222 TACO1Q9BSH4 297 aaKnown RBP19.05■□□□□ 0.64
CAPN3-209ENST00000466222 NSUN3Q9H649 340 aaKnown RBP19.05■□□□□ 0.64
CAPN3-209ENST00000466222 IGLV3-10A0A075B6K4 115 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 PRAMEF12O95522 483 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 BRAFP15056 766 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 NR2C2P49116 596 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 SLC11A2P49281 568 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 NRG1Q02297 640 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 DLX2Q07687 328 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 ADGRE1Q14246 886 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 CCNYQ8ND76 341 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 BHMTQ93088 406 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 GRAMD1AQ96CP6 724 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 CEP41Q9BYV8 373 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 HAUS2Q9NVX0 235 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 NKIRAS1Q9NYS0 192 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 MRPS23Q9Y3D9 190 aaKnown RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 ZNF638Q14966 1978 aaKnown RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 DRGXA6NNA5 263 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 LEFTY2O00292 366 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 SOX1O00570 391 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 DNALI1O14645 258 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 KCNN4O15554 427 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 VAV1P15498 845 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 AVPR1AP37288 418 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 LRIT3Q3SXY7 679 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 SYCE2Q6PIF2 218 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 TDRPQ86YL5 185 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 ARHGAP12Q8IWW6 846 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 USP13Q92995 863 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 ZYG11BQ9C0D3 744 aa19.04■□□□□ 0.64
CAPN3-209ENST00000466222 ZFP37Q9Y6Q3 630 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-209ENST00000466222 ADGRF1Q5T601 910 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 Q6ZNB5 142 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 CCDC91Q7Z6B0 441 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 BBS7Q8IWZ6 715 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 RTL3Q8N8U3 475 aaKnown RBP19.03■□□□□ 0.64
CAPN3-209ENST00000466222 SH3RF2Q8TEC5 729 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 RSAD2Q8WXG1 361 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 MAGEB18Q96M61 343 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 CDCA3Q99618 268 aaPredicted RBP19.03■□□□□ 0.64
CAPN3-209ENST00000466222 SLC39A8Q9C0K1 460 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 TASP1Q9H6P5 420 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 NOL6Q9H6R4 1146 aaKnown RBP19.03■□□□□ 0.64
CAPN3-209ENST00000466222 YY1AP1Q9H869 796 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 SFXN1Q9H9B4 322 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 KCNK9Q9NPC2 374 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 EURLQ9NYK6 297 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 ZNF212Q9UDV6 495 aa19.03■□□□□ 0.64
CAPN3-209ENST00000466222 TCP11X1B4DZS4 312 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 F5H5T6 163 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 DFFAO00273 331 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 MAGEA4P43358 317 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 ZNF135P52742 658 aaPredicted RBP19.02■□□□□ 0.64
CAPN3-209ENST00000466222 SLC18A1P54219 525 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 MLLT1Q03111 559 aaPredicted RBP19.02■□□□□ 0.64
CAPN3-209ENST00000466222 AP1B1Q10567 949 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 OR52K2Q8NGK3 314 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 FRMD8P1Q9BZ68 369 aaPredicted RBP19.02■□□□□ 0.64
CAPN3-209ENST00000466222 PHACTR1Q9C0D0 580 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 CATSPERBQ9H7T0 1116 aa19.02■□□□□ 0.64
CAPN3-209ENST00000466222 KCNK1O00180 336 aa19.02■□□□□ 0.63
CAPN3-209ENST00000466222 MGRN1O60291 552 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms