RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZFP28Q8NHY6 868 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 GABPB2Q8TAK5 448 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 DQX1Q8TE96 717 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 PRPF31Q8WWY3 499 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MCRS1Q96EZ8 462 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 DUS3LQ96G46 650 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ANKRD36BP1Q96IX9 119 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF597Q96LX8 424 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 OLFM1Q99784 485 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 TUBA1CQ9BQE3 449 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MRPL4Q9BYD3 311 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ZCWPW1Q9H0M4 648 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 SNX25Q9H3E2 840 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 HIPK3Q9H422 1215 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 CYP4F11Q9HBI6 524 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MRM3Q9HC36 420 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 GPRC5CQ9NQ84 441 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 GIN1Q9NXP7 522 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MOCS1Q9NZB8 636 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 RCOR3Q9P2K3 495 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 COPG2Q9UBF2 871 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 GABBR1Q9UBS5 961 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 IPO11Q9UI26 975 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 GNPTGQ9UJJ9 305 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 CDH7Q9ULB5 785 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 CDYLQ9Y232 598 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 B3GNT3Q9Y2A9 372 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 RAP2CQ9Y3L5 183 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 NUB1Q9Y5A7 615 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 CEPT1Q9Y6K0 416 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PRSS51A0A1B0GVH4 220 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 TCRBV7S3A2A0A539 114 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 KANSL1LA0AUZ9 987 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 TMEM221A6NGB7 291 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 C2orf71A6NGG8 1288 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ERI2A8K979 691 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 FAM155AB1AL88 458 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 MDM4O15151 490 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 KCNQ2O43526 872 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 LGR5O75473 907 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 BANF1O75531 89 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 FBXO21O94952 628 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CYP2C8P10632 490 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 VDRP11473 427 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CYP2C9P11712 490 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 COL6A2P12110 1019 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CD19P15391 556 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 GLDCP23378 1020 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PIK3R1P27986 724 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 MLH1P40692 756 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PSMD8P48556 350 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CSE1LP55060 971 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 KCNQ4P56696 695 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 TGFB2P61812 414 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 UBXN2AP68543 259 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 OGDHQ02218 1023 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 EMC2Q15006 297 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 SNX17Q15036 470 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PGM5Q15124 567 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 UGP2Q16851 508 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PIGGQ5H8A4 983 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ZNF667Q5HYK9 610 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 RALGPS1Q5JS13 557 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 TCHHL1Q5QJ38 904 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 HEATR6Q6AI08 1181 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC9A4Q6AI14 798 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 LRRC8BQ6P9F7 803 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 FBXL19Q6PCT2 694 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 LINC00299Q6ZSB3 139 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CDHR3Q6ZTQ4 885 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PDZD4Q76G19 769 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CCDC80Q76M96 950 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CAND1Q86VP6 1230 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 HPS6Q86YV9 775 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CAMK1DQ8IU85 385 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 TICAM1Q8IUC6 712 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PSTKQ8IV42 348 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 IGDCC3Q8IVU1 814 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ZBTB8OSQ8IWT0 167 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ADGRF2Q8IZF7 708 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 DSELQ8IZU8 1212 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ZNF513Q8N8E2 541 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 FBXO27Q8NI29 283 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 SYTL5Q8TDW5 730 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 HSPH1Q92598 858 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ISL2Q96A47 359 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ASB9Q96DX5 294 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 RMDN3Q96TC7 470 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 EBF4Q9BQW3 602 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 WDR83Q9BRX9 315 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 C1orf50Q9BV19 199 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 MECRQ9BV79 373 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 EIF2AQ9BY44 585 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC2A11Q9BYW1 496 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 SENP6Q9GZR1 1112 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PORCNQ9H237 461 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 C10orf88Q9H8K7 445 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms