RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C1QTNF1Q9BXJ1 281 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 DPEP3Q9H4B8 488 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 POPDC2Q9HBU9 364 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 XAB2Q9HCS7 855 aaKnown RBP10.15□□□□□ -0.78
PTPRD-207ENST00000463477 ABI2Q9NYB9 513 aaPredicted RBP10.15□□□□□ -0.78
PTPRD-207ENST00000463477 GDE1Q9NZC3 331 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 GRID1Q9ULK0 1009 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 AP4E1Q9UPM8 1137 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 SORCS3Q9UPU3 1222 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 MRPS23Q9Y3D9 190 aaKnown RBP10.15□□□□□ -0.78
PTPRD-207ENST00000463477 TTLL3Q9Y4R7 772 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 USP3Q9Y6I4 520 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.78
PTPRD-207ENST00000463477 ANHXE9PGG2 379 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 PIK3R2O00459 728 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 GPR37L1O60883 481 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ATP2C2O75185 946 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 INHBAP08476 426 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 MLNP12872 115 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 NQO1P15559 274 aaKnown RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 PTPN1P18031 435 aaKnown RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ATF6P18850 670 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 FDFT1P37268 417 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 CCR2P41597 374 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ETV4P43268 484 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 MAGEA11P43364 429 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 NEK3P51956 506 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 AIF1P55008 147 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 RPL10AP62906 217 aaKnown RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ZXDAP98168 799 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 MGAT5Q09328 741 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 DNAJC3Q13217 504 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 SEMA5AQ13591 1074 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 EFTUD2Q15029 972 aaKnown RBP eCLIP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 SLC5A9Q2M3M2 681 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 SLC25A52Q3SY17 297 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 LGSNQ5TDP6 509 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 TTC39BQ5VTQ0 682 aaPredicted RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 PDZD4Q76G19 769 aaPredicted RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 GET4Q7L5D6 327 aaPredicted RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 CAND1Q86VP6 1230 aaKnown RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 SPATA2LQ8IUW3 424 aaPredicted RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 HS6ST3Q8IZP7 471 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ZNF75CPQ92670 426 aaPredicted RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 MTBPQ96DY7 904 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 RMDN2Q96LZ7 410 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 CEP295NLQ96MC4 621 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 OLFM3Q96PB7 478 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 CSPG4P5Q96PW8 444 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 SEPT5Q99719 369 aaPredicted RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 DUSP16Q9BY84 665 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 B3GNT5Q9BYG0 378 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ECT2Q9H8V3 914 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 CRTAC1Q9NQ79 661 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 EIF2B3Q9NR50 452 aaKnown RBP10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ASAH2Q9NR71 780 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 ARHGEF3Q9NR81 526 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 TXLNGQ9NUQ3 528 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 GPATCH2LQ9NWQ4 482 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 HEY1Q9Y5J3 304 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 PATJQ8NI35 1801 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 NOTCH4Q99466 2003 aa10.15□□□□□ -0.79
PTPRD-207ENST00000463477 DOCK8Q8NF50 2099 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 PTPRDP23468 1912 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 DENND4AQ7Z401 1863 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 KLF11O14901 512 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 MOSPD3O75425 235 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 SOAT2O75908 522 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 KRT37O76014 449 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 UNC5CO95185 931 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 TGDSO95455 350 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 FGF19O95750 216 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 MT-ND3P03897 115 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 CCDC130P13994 396 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 ADORA2BP29275 332 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 CCNFP41002 786 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 SLC8A3P57103 927 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 YWHAGP61981 247 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 TDGQ13569 410 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 VEPH1Q14D04 833 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 SETDB1Q15047 1291 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 SEPT7Q16181 437 aaKnown RBP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 KBTBD12Q3ZCT8 623 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 FAM133BQ5BKY9 247 aaKnown RBP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 LRRC6Q86X45 466 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 TMC8Q8IU68 726 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 NPAS3Q8IXF0 933 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 UBALD2Q8IYN6 164 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 AGGF1Q8N302 714 aaeCLIP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 B3GALNT2Q8NCR0 500 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 TCP10LQ8TDR4 215 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 C10orf82Q8WW14 230 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 TCEAL4Q96EI5 215 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 PCED1BQ96HM7 432 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 KCTD15Q96SI1 283 aaPredicted RBP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 PAIP2Q9BPZ3 127 aaKnown RBP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 DHX35Q9H5Z1 703 aaKnown RBP10.14□□□□□ -0.79
PTPRD-207ENST00000463477 ETNK1Q9HBU6 452 aa10.14□□□□□ -0.79
PTPRD-207ENST00000463477 FZD10Q9ULW2 581 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms