RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 OR56A4Q8NGH8 313 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 DPY30Q9C005 99 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 ARMC7Q9H6L4 198 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 ANKZF1Q9H8Y5 726 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.32
NUP58-206ENST00000463407 LTN1O94822 1766 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 BUD23O43709 281 aaKnown RBP13.02□□□□□ -0.33
NUP58-206ENST00000463407 DAB1O75553 588 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 GRK2P25098 689 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 RPS7P62081 194 aaKnown RBP13.02□□□□□ -0.33
NUP58-206ENST00000463407 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 AADACL2Q6P093 401 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 SPPL2BQ8TCT7 592 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 EFCAB1Q9HAE3 211 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 A0A088AWK7 358 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 SEC22BO75396 215 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 IFNA14P01570 189 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
NUP58-206ENST00000463407 SLC1A6P48664 564 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 TSHZ1Q6ZSZ6 1077 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 USP7Q93009 1102 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 FUT8Q9BYC5 575 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 MID1IP1Q9NPA3 183 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 NINJ2Q9NZG7 142 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 SAE1Q9UBE0 346 aaPredicted RBP13.02□□□□□ -0.33
NUP58-206ENST00000463407 DMGDHQ9UI17 866 aaKnown RBP13.02□□□□□ -0.33
NUP58-206ENST00000463407 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 TOMM20Q15388 145 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 ALFQ53S48 1182 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 INPP5DQ92835 1189 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 STK39Q9UEW8 545 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 GTF2A1LQ9UNN4 478 aa13.02□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 SERPINI2O75830 405 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 ZNF682O95780 498 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 MT-CO1P00395 513 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 SRLQ86TD4 932 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 MON1AQ86VX9 555 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 GPSM1Q86YR5 675 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 LNX1Q8TBB1 728 aaPredicted RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 FAM126AQ9BYI3 521 aaPredicted RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 SOX13Q9UN79 622 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 H3BMM5 538 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 CTPS1P17812 591 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 SSTR1P30872 391 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 MAD2L1Q13257 205 aaPredicted RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 P3H2Q8IVL5 708 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 HOMEZQ8IX15 550 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 COLGALT2Q8IYK4 626 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 A0A087X1B8 175 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 NFKBIEO00221 500 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 PDE2AO00408 941 aaPredicted RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 BAIAP3O94812 1187 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 NUDT14O95848 222 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 EIF2S1P05198 315 aaKnown RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 GSTM1P09488 218 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 PCID2Q5JVF3 399 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 ATAD3BQ5T9A4 648 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 ZCCHC8Q6NZY4 707 aaKnown RBP13.01□□□□□ -0.33
NUP58-206ENST00000463407 LRRC8BQ6P9F7 803 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 LRRC55Q6ZSA7 311 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 SCN3BQ9NY72 215 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 19.2
NUP58-206ENST00000463407 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 FAM237AA0A1B0GTK4 181 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 ANKDD1BA6NHY2 528 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 CCND1P24385 295 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 PPP2R1BP30154 601 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TAF10Q12962 218 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 CCL14Q16627 93 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 CFAP52Q8N1V2 620 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 TLR10Q9BXR5 811 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 PIF1Q9H611 641 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 GRM6O15303 877 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 HSPA14Q0VDF9 509 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 EXOC2Q96KP1 924 aa13.01□□□□□ -0.33
NUP58-206ENST00000463407 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
NUP58-206ENST00000463407 C1orf232A0A0U1RR37 186 aa13□□□□□ -0.33
NUP58-206ENST00000463407 TSPAN1O60635 241 aa13□□□□□ -0.33
NUP58-206ENST00000463407 SKIV2L2P42285 1042 aaKnown RBP13□□□□□ -0.33
NUP58-206ENST00000463407 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
NUP58-206ENST00000463407 WLSQ5T9L3 541 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms