RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SLC39A8Q9C0K1 460 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 POLR1EQ9GZS1 481 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 GBA3Q9H227 469 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CCDC68Q9H2F9 335 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CRISPLD1Q9H336 500 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 USP29Q9HBJ7 922 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PIH1D1Q9NWS0 290 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CXXC1Q9P0U4 656 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 IGSF9Q9P2J2 1179 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF510Q9Y2H8 683 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 COMMD10Q9Y6G5 202 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CEP290O15078 2479 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TTC3P53804 2025 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 A0A1W2PRU2 124 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 EBAG9O00559 213 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 COPEO14579 308 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC9A3R1O14745 358 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MATN3O15232 486 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TGM5O43548 720 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 BANF1O75531 89 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SYF2O95926 243 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SNRPAP09012 282 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 VAV1P15498 845 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PGAM1P18669 254 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 NPY2RP49146 381 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MNX1P50219 401 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CDH4P55283 916 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RHOAP61586 193 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RPS24P62847 133 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 GNA12Q03113 381 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF33AQ06730 810 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MGAT5Q09328 741 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC10A2Q12908 348 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 HNRNPDQ14103 355 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 FASTKD3Q14CZ7 662 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PRKD1Q15139 912 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 UGP2Q16851 508 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ACCSLQ4AC99 568 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RHBDF2Q6PJF5 856 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC26A11Q86WA9 606 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 NDUFAF2Q8N183 169 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZNF557Q8N988 423 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 OR52K1Q8NGK4 314 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 BCAS4Q8TDM0 211 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ARNTL2Q8WYA1 636 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PSMG2Q969U7 264 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 HMCESQ96FZ2 354 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TEKT5Q96M29 485 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 KLHL5Q96PQ7 755 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 EBNA1BP2Q99848 306 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ADAM33Q9BZ11 813 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ZBP1Q9H171 429 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MAGEH1Q9H213 219 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 CERS4Q9HA82 394 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MAN1C1Q9NR34 630 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 EIF2B3Q9NR50 452 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C20orf96Q9NUD7 363 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TLK1Q9UKI8 766 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SMG5Q9UPR3 1016 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 FNDC3AQ9Y2H6 1198 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TRIP11Q15643 1979 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 MAGEB16A2A368 324 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 AVILO75366 819 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ABLIM3O94929 683 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 AP2A1O95782 977 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C1RP00736 705 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 NFKBIAP25963 317 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ITGB8P26012 769 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PMLP29590 882 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SCNN1BP51168 640 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 WNT3AP56704 352 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 IL10RBQ08334 325 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 POU6F1Q14863 301 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TERF2Q15554 542 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RAB30Q15771 203 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TAF1BQ53T94 588 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PIK3R6Q5UE93 754 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 PPP2R2DQ66LE6 453 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 KLHDC10Q6PID8 442 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 KDM7AQ6ZMT4 941 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TPGS1Q6ZTW0 290 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RAPH1Q70E73 1250 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 YAF2Q8IY57 180 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 C4orf33Q8N1A6 199 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 NPWQ8N729 165 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 DNAJC5GQ8N7S2 189 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 EFHBQ8N7U6 833 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ANKS4BQ8N8V4 417 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 OR7D4Q8NG98 312 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 LRRC8CQ8TDW0 803 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SLC22A17Q8WUG5 538 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 HERVK_113Q902F9 699 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 USP13Q92995 863 aaPredicted RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 ALKBH8Q96BT7 664 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 RTP4Q96DX8 246 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 TRMT2BQ96GJ1 504 aaKnown RBP4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 OLFM3Q96PB7 478 aa4.2□□□□□ -1.74
ATP13A3-206ENST00000461660 SEMA3CQ99985 751 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms