RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZKSCAN2Q63HK3 967 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 OLFML1Q6UWY5 402 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 KRT74Q7RTS7 529 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 SCN4BQ8IWT1 228 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ENDOVQ8N8Q3 282 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 SLC9A6Q92581 669 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 KLHL29Q96CT2 875 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 FEM1CQ96JP0 617 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 BAG1Q99933 345 aaPredicted RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 SLC22A11Q9NSA0 550 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ABHD10Q9NUJ1 306 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 TBCCD1Q9NVR7 557 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 MPP6Q9NZW5 540 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PTGFRNQ9P2B2 879 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 AMFRQ9UKV5 643 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 GABRQQ9UN88 632 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 B3GNT3Q9Y2A9 372 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ADGRA2Q96PE1 1338 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 TEX13CA0A0J9YWL9 993 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 LIPT2A6NK58 231 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 SEC14L2O76054 403 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 CHRM2P08172 466 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 RARGP13631 454 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 COX7A2P14406 83 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 CD72P21854 359 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ITPKBP27987 946 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 GCH1P30793 250 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 SLC8A1P32418 973 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ADRA1BP35368 520 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 PSMB10P40306 273 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ARL1P40616 181 aaPredicted RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 GARSP41250 739 aaKnown RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 AGTR2P50052 363 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 RPS6KA3P51812 740 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 JAK3P52333 1124 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 EIF3BP55884 814 aaKnown RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 TPTEP56180 551 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 NXPH1P58417 271 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 GPC5P78333 572 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 TMEM115Q12893 351 aaPredicted RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 EPS8Q12929 822 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 STK4Q13043 487 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 PLCB4Q15147 1175 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 GPR162Q16538 588 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 CDC37Q16543 378 aaPredicted RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 NAPEPLDQ6IQ20 393 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 MTFR2Q6P444 385 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 KYAT3Q6YP21 454 aaKnown RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 SLC39A5Q6ZMH5 540 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 RRM2BQ7LG56 351 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 RNF144BQ7Z419 303 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ADGRF3Q8IZF5 1079 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 CAGE1Q8TC20 777 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 NOC3LQ8WTT2 800 aaKnown RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 RAB40AQ8WXH6 277 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 NCSTNQ92542 709 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 KLHL15Q96M94 604 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 C5orf34Q96MH7 638 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ALG8Q9BVK2 526 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 SIL1Q9H173 461 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 TTC12Q9H892 705 aaPredicted RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 SNX15Q9NRS6 342 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ZNF70Q9UC06 446 aaPredicted RBP3.17□□□□□ -1.9
HPS3-203ENST00000460822 SLC25A13Q9UJS0 675 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 SH2B3Q9UQQ2 575 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 ZNF711Q9Y462 761 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 INSL6Q9Y581 213 aa3.17□□□□□ -1.9
HPS3-203ENST00000460822 MASP2O00187 686 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 LDLRAD4O15165 306 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 CCNT1O60563 726 aaKnown RBP3.16□□□□□ -1.9
HPS3-203ENST00000460822 ESRRBO95718 433 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 ONECUT2O95948 504 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 APOA4P06727 396 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 IL11P20809 199 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 FPR3P25089 353 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 NNMTP40261 264 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 EIF2DP41214 584 aaKnown RBP3.16□□□□□ -1.9
HPS3-203ENST00000460822 UBA7P41226 1012 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 SLC37A1P57057 533 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 SHC2P98077 582 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 COL10A1Q03692 680 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 CDC16Q13042 620 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 GAB1Q13480 694 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 IL13RA2Q14627 380 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 TTI2Q6NXR4 508 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 RPUSD3Q6P087 351 aaKnown RBP3.16□□□□□ -1.9
HPS3-203ENST00000460822 TMEM88Q6PEY1 159 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 NCEH1Q6PIU2 408 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 CYP20A1Q6UW02 462 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 Q6ZWC4 215 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
HPS3-203ENST00000460822 SNX32Q86XE0 403 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 BRSK2Q8IWQ3 736 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 CNPY4Q8N129 248 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 TMEM116Q8NCL8 245 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 SRFBP1Q8NEF9 429 aaKnown RBP3.16□□□□□ -1.9
HPS3-203ENST00000460822 C2CD4CQ8TF44 421 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 ASB10Q8WXI3 467 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 ATP2A3Q93084 1043 aa3.16□□□□□ -1.9
HPS3-203ENST00000460822 RFKQ969G6 155 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms