RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 CCDC173Q0VFZ6 552 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 SMAD4Q13485 552 aaKnown RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 CBX2Q14781 532 aaPredicted RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 SLC5A9Q2M3M2 681 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 EFHC1Q5JVL4 640 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 CYP4A22Q5TCH4 519 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 BSPRYQ5W0U4 402 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 CES5AQ6NT32 575 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 TMC5Q6UXY8 1006 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 MMS22LQ6ZRQ5 1243 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 GRASPQ7Z6J2 395 aaPredicted RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 PASD1Q8IV76 773 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 IGDCC3Q8IVU1 814 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 ELMOD1Q8N336 334 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 LINC01356Q8N9X3 169 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 SPC24Q8NBT2 197 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 GIPC2Q8TF65 315 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 MZB1Q8WU39 189 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 UBE2Q2Q8WVN8 375 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 PIWIL1Q96J94 861 aaKnown RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 RIPOR3Q96MK2 946 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 SLITRK1Q96PX8 696 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 NPY6RQ99463 290 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 DDX23Q9BUQ8 820 aaKnown RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 TRIM62Q9BVG3 475 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 SLC46A2Q9BY10 475 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 ULBP1Q9BZM6 244 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 RNF38Q9H0F5 515 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 TASP1Q9H6P5 420 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 LRRC4Q9HBW1 653 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 ASAH2Q9NR71 780 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 TLR8Q9NR97 1041 aaKnown RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 KCND1Q9NSA2 647 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 ABCC13Q9NSE7 274 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 HCFC1R1Q9NWW0 138 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 CLDND1Q9NY35 253 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 OBP2AQ9NY56 170 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 RRN3Q9NYV6 651 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 ADAM22Q9P0K1 906 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 EPS15L1Q9UBC2 864 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 CHORDC1Q9UHD1 332 aaPredicted RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 CD207Q9UJ71 328 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 USP15Q9Y4E8 981 aaPredicted RBP5.88□□□□□ -1.47
PTPN12-209ENST00000460731 OBSL1O75147 1896 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 DENND4AQ7Z401 1863 aa5.88□□□□□ -1.47
PTPN12-209ENST00000460731 C2CD4BA6NLJ0 364 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 GOLGA6L6A8MZA4 724 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 UPK3BL1B0FP48 263 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 UPK3BL2E5RIL1 263 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 AKR1B10O60218 316 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 HSF2BPO75031 334 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 CLSTN1O94985 981 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 LTFP02788 710 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 H2AFZP0C0S5 128 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 LAMP2P13473 410 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 RRM1P23921 792 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 GABRR2P28476 465 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 MAPK1P28482 360 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 RFC1P35251 1148 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 CYLC1P35663 651 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 MATKP42679 507 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 PTPN9P43378 593 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 KIR2DL1P43626 348 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 KIR2DL2P43627 348 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 MAPK8P45983 427 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 ERVFRD-1P60508 538 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 YWHAGP61981 247 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 GPC5P78333 572 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 NTHL1P78549 312 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 ZXDBP98169 803 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 RPL6Q02878 288 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 MTF1Q14872 753 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 ACAP1Q15027 740 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 TAF5Q15542 800 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 TSNAXIP1Q2TAA8 658 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 HS1BP3Q53T59 392 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 TDRD12Q587J7 1177 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 TMEM201Q5SNT2 666 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 CCDC122Q5T0U0 273 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 RARS2Q5T160 578 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 HECTD3Q5T447 861 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 SYPL2Q5VXT5 272 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 TRNP1Q6NT89 227 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 TOGARAM2Q6ZUX3 1019 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 FAM183BPQ6ZVS7 135 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 H2AFVQ71UI9 128 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 SIX6OS1Q8N1H7 587 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 NIPA2Q8N8Q9 360 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 MSANTD4Q8NCY6 345 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 MAFAQ8NHW3 353 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 ITFG1Q8TB96 612 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 IPO4Q8TEX9 1081 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 CLEC4CQ8WTT0 213 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 ATXN2LQ8WWM7 1075 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 NDRG1Q92597 394 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 ANP32BQ92688 251 aaKnown RBP5.87□□□□□ -1.47
PTPN12-209ENST00000460731 FGF13Q92913 245 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 FBXO32Q969P5 355 aa5.87□□□□□ -1.47
PTPN12-209ENST00000460731 AZIN2Q96A70 460 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms