RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CBX4O00257 560 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 RASA4O43374 803 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 KDELR3O43731 214 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 NARSO43776 548 aaKnown RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CD48P09326 243 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CES1P23141 567 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CCNCP24863 283 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 HLA-FP30511 346 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 HSPA9P38646 679 aaKnown RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 OPRD1P41143 372 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CSKP41240 450 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 MAPK8P45983 427 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CKAP4Q07065 602 aaKnown RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 IL10RBQ08334 325 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 LMAN2Q12907 356 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 STARD3Q14849 445 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 INO80DQ53TQ3 878 aaPredicted RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 PITRM1Q5JRX3 1037 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 MBLAC2Q68D91 279 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CXorf57Q6NSI4 855 aaKnown RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 NYAP1Q6ZVC0 841 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 KIAA0907Q7Z7F0 614 aaPredicted RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 SLC13A5Q86YT5 568 aaPredicted RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CDKL3Q8IVW4 592 aaPredicted RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 PLD5Q8N7P1 536 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CCNYQ8ND76 341 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 TFB1MQ8WVM0 346 aaKnown RBP11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 ALG3Q92685 438 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 FATE1Q969F0 183 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 TTC17Q96AE7 1141 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 VAT1Q99536 393 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 SUN2Q9UH99 717 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 CA14Q9ULX7 337 aa11.27□□□□□ -0.61
SMNDC1-203ENST00000460483 DENND4AQ7Z401 1863 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 OTOL1A6NHN0 477 aaPredicted RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 ESPNB1AK53 854 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 SYNCRIPO60506 623 aaKnown RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 FGGP02679 453 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 ATP1A1P05023 1023 aaKnown RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 CISD3P0C7P0 127 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 STIP1P31948 543 aaKnown RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 MARCKSL1P49006 195 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 SGSHP51688 502 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 DYNLT1P63172 113 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 KDSRQ06136 332 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 RAD51Q06609 339 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 CCDC15Q0P6D6 951 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 GALNT2Q10471 571 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 SERINC3Q13530 473 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 HNRNPDQ14103 355 aaKnown RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 UBXN2BQ14CS0 331 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 PON2Q15165 354 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 EOGTQ5NDL2 527 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 NCBP2-AS2Q69YL0 99 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 C4orf22Q6V702 233 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 SYT10Q6XYQ8 523 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 DSG4Q86SJ6 1040 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 CIR1Q86X95 450 aaPredicted RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 CHPFQ8IZ52 775 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 ATP11CQ8NB49 1132 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 MNS1Q8NEH6 495 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 ARHGEF2Q92974 986 aaKnown RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 HDAC11Q96DB2 347 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 TSGA13Q96PP4 275 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 ACE2Q9BYF1 805 aaPredicted RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 CEP44Q9C0F1 390 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 LRRC19Q9H756 370 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 FBRSQ9HAH7 460 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 UBA2Q9UBT2 640 aaPredicted RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 IPO11Q9UI26 975 aaKnown RBP11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
SMNDC1-203ENST00000460483 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 C2orf16Q68DN1 1984 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GOLGA6CA6NDK9 693 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GOLGA6BA6NDN3 693 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 FAM170BA6NMN3 283 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 H7C0C1 242 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 RNASEH1O60930 286 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GOLGA6DP0CG33 693 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 KRT10P13645 584 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 HNRNPLP14866 589 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 NFKBIAP25963 317 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 CD70P32970 193 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GARSP41250 739 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ATP5OP48047 213 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 SLC6A11P48066 632 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 PAPOLAP51003 745 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF211Q13398 564 aaPredicted RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF235Q14590 738 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 GRM3Q14832 879 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 CCNG2Q16589 344 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 ACCSLQ4AC99 568 aa11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 FNDC3BQ53EP0 1204 aaKnown RBP11.25□□□□□ -0.61
SMNDC1-203ENST00000460483 FSCBQ5H9T9 825 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms