RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 CCDC114Q96M63 670 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 PPP1R9BQ96SB3 815 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 FAM129BQ96TA1 746 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 TRIM62Q9BVG3 475 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 DUSP23Q9BVJ7 150 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 PREBQ9HCU5 417 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 KLHL11Q9NVR0 708 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 ARHGAP20Q9P2F6 1191 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 SLC12A6Q9UHW9 1150 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 TRAF3IP3Q9Y228 551 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 BOD1L1Q8NFC6 3051 aa8.13□□□□□ -1.11
HPS4-207ENST00000459918 SYNJ2BP-COX16A0A087WUM0 186 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 A6NNZ2 444 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 O00370 1275 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 PIAS2O75928 621 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 FBXO21O94952 628 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 TNFSF15O95150 251 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 MYL1P05976 194 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 TACR2P21452 398 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 HNRNPA2B1P22626 353 aaKnown RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 TBXAS1P24557 533 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 CLDN2P57739 230 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 HNRNPKP61978 463 aaKnown RBP eCLIP8.12□□□□□ -1.11
HPS4-207ENST00000459918 ZNF177Q13360 481 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 SLC12A1Q13621 1099 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 ISXQ2M1V0 245 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 TTC39BQ5VTQ0 682 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 AGBL4Q5VU57 503 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 CDCP2Q5VXM1 449 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 OR6B2Q6IFH4 312 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 ZCCHC8Q6NZY4 707 aaKnown RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 TMEM270Q6UE05 265 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 RBM44Q6ZP01 1051 aaKnown RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 Q6ZVU0 165 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 USP53Q70EK8 1073 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 EFL1Q7Z2Z2 1120 aaKnown RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 TAC4Q86UU9 113 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 JAMLQ86YT9 394 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 OR13H1Q8NG92 308 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 TMEM174Q8WUU8 243 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 AZIN2Q96A70 460 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 MYEOVQ96EZ4 313 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 FAXDC2Q96IV6 333 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 FCRL2Q96LA5 508 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 RPRD1AQ96P16 312 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 IL12RB2Q99665 862 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 MUC3BQ9H195 1237 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 FAM204AQ9H8W3 233 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 USP29Q9HBJ7 922 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 ASCL3Q9NQ33 180 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 NCKIPSDQ9NZQ3 722 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 COX16Q9P0S2 106 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 VPS28Q9UK41 221 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 CFAP45Q9UL16 551 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 KIAA1257Q9ULG3 409 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 PCDHA7Q9UN72 937 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 NAALADL1Q9UQQ1 740 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 PCDHB4Q9Y5E5 795 aa8.12□□□□□ -1.11
HPS4-207ENST00000459918 ARID1BQ8NFD5 2236 aaPredicted RBP8.12□□□□□ -1.11
HPS4-207ENST00000459918 A0A1B0GVL5 298 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 K7ENP7 123 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 K7ESM1 405 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 MUSKO15146 869 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 CETN3O15182 167 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 ALOX15BO15296 676 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 SART1O43290 800 aaKnown RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 ACTN4O43707 911 aaKnown RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 GJB6O95452 261 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 PFKFB1P16118 471 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 TGM2P21980 687 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 RECQLP46063 649 aaPredicted RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 OXCT1P55809 520 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 SPIDRQ14159 915 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 NR0B2Q15466 257 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 DLG2Q15700 870 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 ZC3H12AQ5D1E8 599 aaKnown RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 PMF1Q6P1K2 205 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 INO80CQ6PI98 192 aaPredicted RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 ATG14Q6ZNE5 492 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 Q6ZSR6 202 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 CCAR2Q8N163 923 aaKnown RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 SCML4Q8N228 414 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 PPM1KQ8N3J5 372 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 ATP6V0D2Q8N8Y2 350 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 ATP11CQ8NB49 1132 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 ZNF548Q8NEK5 533 aaPredicted RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 WDR36Q8NI36 951 aaKnown RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 ERCC4Q92889 916 aaPredicted RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 GLMNQ92990 594 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 PPP1R16AQ96I34 528 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 LMLNQ96KR4 655 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 BTN2A3PQ96KV6 586 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 CCNL2Q96S94 520 aaPredicted RBP8.11□□□□□ -1.11
HPS4-207ENST00000459918 TSG101Q99816 390 aa8.11□□□□□ -1.11
HPS4-207ENST00000459918 EPB41L5Q9HCM4 733 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms