RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TRAP1Q12931 704 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NME3Q13232 169 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPIL2Q13356 520 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MSLNQ13421 630 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LSAMPQ13449 338 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 VGLL4Q14135 290 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TTLL12Q14166 644 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTK2BQ14289 1009 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SQLEQ14534 574 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 INPP5AQ14642 412 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRIK4Q16099 956 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRRC36Q1X8D7 754 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM83EQ2M2I3 478 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SOWAHAQ2M3V2 549 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC9B1Q4ZJI4 515 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SFT2D3Q587I9 215 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCAF6Q58WW2 860 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TREML2Q5T2D2 321 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 AGAP9Q5VTM2 703 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 C9orf57Q5W0N0 161 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LPCAT4Q643R3 524 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 KRT80Q6KB66 452 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FSTL4Q6MZW2 842 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRRC8EQ6NSJ5 796 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TIGD7Q6NT04 549 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRMT9Q6P2P2 845 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FRMD7Q6ZUT3 714 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIWIL4Q7Z3Z4 852 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMC7Q7Z402 723 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRRT2Q7Z6L0 340 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RAB44Q7Z6P3 723 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CMC1Q7Z7K0 106 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLEC14AQ86T13 490 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 KBTBD6Q86V97 674 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERO1BQ86YB8 467 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HPS6Q86YV9 775 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC22A9Q8IVM8 553 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCDC117Q8IWD4 279 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SULF1Q8IWU6 871 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF567Q8N184 647 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CRYBG2Q8N1P7 616 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMEM86AQ8N2M4 240 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATPAF2Q8N5M1 289 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CPSF7Q8N684 471 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LINC01465Q8N7H1 131 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCNYL1Q8N7R7 359 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF781Q8N8C0 355 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TERB1Q8NA31 727 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCYOX1LQ8NBM8 494 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 B3GALNT2Q8NCR0 500 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 BHLHE22Q8NFJ8 381 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TNIP2Q8NFZ5 429 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 OR52K1Q8NGK4 314 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 B4GALNT2Q8NHY0 566 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FBXO27Q8NI29 283 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC7A14Q8TBB6 771 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM81AQ8TBF8 368 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC2A14Q8TDB8 520 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZC3H15Q8WU90 426 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCTD13Q8WZ19 329 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF34Q969K3 372 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 AZIN2Q96A70 460 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 EMID1Q96A84 441 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LENG1Q96BZ8 264 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCPSQ96C86 337 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RCN3Q96D15 328 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HDAC11Q96DB2 347 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 OTUD5Q96G74 571 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATXN7L3BQ96GX2 97 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MPP4Q96JB8 637 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 VPS39Q96JC1 886 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ELMO2Q96JJ3 720 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF778Q96MU6 729 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC2A13Q96QE2 648 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GCNAQ96QF7 691 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HAPLN3Q96S86 360 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPP1R16BQ96T49 567 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CDRT15Q96T59 188 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NDNQ99608 321 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GPR22Q99680 433 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HNRNPABQ99729 332 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TBL1YQ9BQ87 522 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRPL57Q9BQC6 102 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 C11orf84Q9BUA3 381 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC25A23Q9BV35 468 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GATA5Q9BWX5 397 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 DUSP16Q9BY84 665 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SHCBP1LQ9BZQ2 653 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 DRC3Q9H069 523 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRPV6Q9H1D0 765 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRPL46Q9H2W6 279 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNPEPQ9H4A4 650 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RHOJQ9H4E5 214 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRDM12Q9H4Q4 367 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF696Q9H7X3 374 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF395Q9H8N7 513 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 WDR41Q9HAD4 459 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRM3Q9HC36 420 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRPC7Q9HCX4 862 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TIMMDC1Q9NPL8 285 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms