RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 STN1Q9H668 368 aaKnown RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 RNF186Q9NXI6 227 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 NYNRINQ9P2P1 1898 aaKnown RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 MAFKO60675 156 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 OAZ2O95190 189 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 TPH1P17752 444 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 GRK2P25098 689 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 GMPRP36959 345 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 CDK7P50613 346 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 ACLYP53396 1101 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 AQP5P55064 265 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 CLLU1OSQ5K130 101 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 WASHC2DQ5SRD0 308 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 FSTL4Q6MZW2 842 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 TRAF7Q6Q0C0 670 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 ALYREFQ86V81 257 aaKnown RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC43-202ENST00000457422 LINC01599Q8WXQ3 324 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 FUBP3Q96I24 572 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC43-202ENST00000457422 FCRL2Q96LA5 508 aaPredicted RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 PPP1R2P1Q96PQ5 205 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 AGAP2Q99490 1192 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 NMUR1Q9HB89 426 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 CHRAC1Q9NRG0 131 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 ABI2Q9NYB9 513 aaPredicted RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 TMEM216Q9P0N5 145 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 COPG2Q9UBF2 871 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 MARCOQ9UEW3 520 aaPredicted RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 NUDT5Q9UKK9 219 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 L3MBTL1Q9Y468 752 aa17■□□□□ 0.31
CCDC43-202ENST00000457422 MRPL42Q9Y6G3 142 aaKnown RBP17■□□□□ 0.31
CCDC43-202ENST00000457422 A0A1W2PQH9 124 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 CAPN14A8MX76 684 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 KCNU1A8MYU2 1149 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 MATN3O15232 486 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 TIMM44O43615 452 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 MPOP05164 745 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 KITP10721 976 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 CKBP12277 381 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 MPP3Q13368 585 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 MBTPS1Q14703 1052 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 HSP90AA5PQ58FG0 334 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 AFMIDQ63HM1 303 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 CMC1Q7Z7K0 106 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 RNF180Q86T96 592 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 CCDC117Q8IWD4 279 aaPredicted RBP16.99■□□□□ 0.31
CCDC43-202ENST00000457422 COLGALT2Q8IYK4 626 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 DCP1BQ8IZD4 617 aaKnown RBP16.99■□□□□ 0.31
CCDC43-202ENST00000457422 PIWIL2Q8TC59 973 aaKnown RBP16.99■□□□□ 0.31
CCDC43-202ENST00000457422 SH3TC2Q8TF17 1288 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 AZIN2Q96A70 460 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 ATXN7L3BQ96GX2 97 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 SERPINB11Q96P15 392 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 CADM1Q9BY67 442 aaKnown RBP16.99■□□□□ 0.31
CCDC43-202ENST00000457422 NSMCE4AQ9NXX6 385 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 FNIP2Q9P278 1114 aa16.99■□□□□ 0.31
CCDC43-202ENST00000457422 HTTP42858 3142 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 TTC3P53804 2025 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 WASH4PA8MWX3 477 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 ANXA9O76027 345 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 SLC1A6P48664 564 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 FAM189BP81408 668 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 CLEC14AQ86T13 490 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 LRRC49Q8IUZ0 686 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 WDR75Q8IWA0 830 aaKnown RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 OR6Y1Q8NGX8 325 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 ZNF419Q96HQ0 510 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 SLC39A8Q9C0K1 460 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 TRPV6Q9H1D0 765 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 GLOD4Q9HC38 313 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 C20orf96Q9NUD7 363 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 NOP53Q9NZM5 478 aaKnown RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 SCML2Q9UQR0 700 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 MOCS2O96007 188 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 ESRRAP11474 423 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 KCNA4P22459 653 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 HADHAP40939 763 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 CSRP3P50461 194 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 TBCCQ15814 346 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 MAP3K21Q5TCX8 1036 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 SDHAF4Q5VUM1 108 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 PDPK2PQ6A1A2 396 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 TIGD7Q6NT04 549 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 MSANTD2Q6P1R3 559 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 C8orf48Q96LL4 319 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 C1orf74Q96LT6 269 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 TBL1YQ9BQ87 522 aa16.98■□□□□ 0.31
CCDC43-202ENST00000457422 TACO1Q9BSH4 297 aaKnown RBP16.98■□□□□ 0.31
CCDC43-202ENST00000457422 E9PAM4 449 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 GSC2O15499 205 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 ITM2AO43736 263 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 NMBRP28336 390 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 ABCG1P45844 678 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 GPR15P49685 360 aa16.97■□□□□ 0.31
CCDC43-202ENST00000457422 NFE2Q16621 373 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms