RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 CCDC106Q9BWC9 280 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 CHRAC1Q9NRG0 131 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 ARMCX1Q9P291 453 aa15.36■□□□□ 0.05
LDLR-202ENST00000455727 MARCOQ9UEW3 520 aaPredicted RBP15.36■□□□□ 0.05
LDLR-202ENST00000455727 PAGE1O75459 146 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ANXA9O76027 345 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 CPA3P15088 417 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 GNAZP19086 355 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 MAP2K2P36507 400 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 HARS2P49590 506 aaKnown RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 NRG1Q02297 640 aaPredicted RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 MPP3Q13368 585 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ARTNQ5T4W7 220 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ARHGAP24Q8N264 748 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 PCSK9Q8NBP7 692 aaKnown RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 PPP4R1Q8TF05 950 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 NSMCE1Q8WV22 266 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 NUDCD1Q96RS6 583 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ARHGAP39Q9C0H5 1083 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 SIK2Q9H0K1 926 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 DCLRE1BQ9H816 532 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 C20orf96Q9NUD7 363 aaPredicted RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 DNAJC16Q9Y2G8 782 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 MATN3O15232 486 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 MAFKO60675 156 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ITGB1P05556 798 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 TPBGLP0DKB5 382 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 RALBP11234 206 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ALOX15P16050 662 aaPredicted RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 GRIK1P39086 918 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 TRIM32Q13049 653 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 PDPK2PQ6A1A2 396 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 CMC1Q7Z7K0 106 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 TREML1Q86YW5 311 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 LRRC49Q8IUZ0 686 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ATPAF2Q8N5M1 289 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 TEX9Q8N6V9 391 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 URGCPQ8TCY9 931 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 MCUR1Q96AQ8 359 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 ZNF778Q96MU6 729 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 RILPQ96NA2 401 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 PGLYRP2Q96PD5 576 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 NMRK2Q9NPI5 230 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 FNIP2Q9P278 1114 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 NKX1-2Q9UD57 310 aaPredicted RBP15.35■□□□□ 0.05
LDLR-202ENST00000455727 TAGLN3Q9UI15 199 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 MYO16Q9Y6X6 1858 aa15.35■□□□□ 0.05
LDLR-202ENST00000455727 FRMPD3Q5JV73 1810 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 DIAPH2O60879 1101 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 EOMESO95936 686 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 MYL4P12829 197 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 CSRP3P50461 194 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 TUBB3Q13509 450 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 PCID2Q5JVF3 399 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 AFMIDQ63HM1 303 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 OTOP3Q7RTS5 596 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 SCD5Q86SK9 330 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 LCA5Q86VQ0 697 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 CASP10Q92851 521 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 FCRL2Q96LA5 508 aaPredicted RBP15.34■□□□□ 0.05
LDLR-202ENST00000455727 SORT1Q99523 831 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 APOL2Q9BQE5 337 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 GLOD4Q9HC38 313 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 GEMIN8Q9NWZ8 242 aaKnown RBP15.34■□□□□ 0.05
LDLR-202ENST00000455727 A0A096LPK6 155 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 KCNU1A8MYU2 1149 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 DFFAO00273 331 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 MAGEC1O60732 1142 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 TPH1P17752 444 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 AOC1P19801 751 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 YY1P25490 414 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 NMBRP28336 390 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 ABCE1P61221 599 aaKnown RBP15.34■□□□□ 0.05
LDLR-202ENST00000455727 TIGD7Q6NT04 549 aaPredicted RBP15.34■□□□□ 0.05
LDLR-202ENST00000455727 C1orf74Q96LT6 269 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 MYCBPQ99417 103 aaPredicted RBP15.34■□□□□ 0.05
LDLR-202ENST00000455727 TBL1YQ9BQ87 522 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 EBF4Q9BQW3 602 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 C1orf21Q9H246 121 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 RGS18Q9NS28 235 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 DNAJC28Q9NX36 388 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 UBP1Q9NZI7 540 aa15.34■□□□□ 0.05
LDLR-202ENST00000455727 WASH4PA8MWX3 477 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 B2RBV5 119 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 TMEM189-UBE2V1I3L0A0 370 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 ENTPD5O75356 428 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 LYPLA1O75608 230 aaPredicted RBP15.33■□□□□ 0.05
LDLR-202ENST00000455727 OAZ2O95190 189 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 C2P06681 752 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 DNAJB1P25685 340 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 RAP1GDS1P52306 607 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 ITGA7Q13683 1181 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 ARMC3Q5W041 872 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 PKN3Q6P5Z2 889 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 RFWD3Q6PCD5 774 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 PLD6Q8N2A8 252 aaKnown RBP15.33■□□□□ 0.05
LDLR-202ENST00000455727 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.05
LDLR-202ENST00000455727 PTCD2Q8WV60 388 aaKnown RBP15.33■□□□□ 0.05
LDLR-202ENST00000455727 AZIN2Q96A70 460 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms