RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TUSC1Q2TAM9 212 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ZC3H12AQ5D1E8 599 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 FSCBQ5H9T9 825 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ACBD5Q5T8D3 534 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 RAP1GAP2Q684P5 730 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 NEK5Q6P3R8 708 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 TMEM110Q86TL2 294 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 MARCH9Q86YJ5 346 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 APCDD1Q8J025 514 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 FMR1NBQ8N0W7 255 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 LSMEM2Q8N112 164 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 SPATA20Q8TB22 786 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 ADAM32Q8TC27 787 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 CLEC4CQ8WTT0 213 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 KLHDC7BQ96G42 594 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 RPL10LQ96L21 214 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 TIGD1Q96MW7 591 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 NOX5Q96PH1 765 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 SRRTQ9BXP5 876 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 PRORYQ9H606 182 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 FAM204AQ9H8W3 233 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 EBF2Q9HAK2 575 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 USP29Q9HBJ7 922 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 CNTN6Q9UQ52 1028 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 CLCA2Q9UQC9 943 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 NBEAQ8NFP9 2946 aa8.26□□□□□ -1.09
NIF3L1-209ENST00000454952 DOCK9Q9BZ29 2069 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 NEMP2A6NFY4 417 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 MCF2LO15068 1137 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ATP9BO43861 1147 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 HSF2BPO75031 334 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 IGLV3-25P01717 112 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ALPPL2P10696 532 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 PDGFRAP16234 1089 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 GLDCP23378 1020 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 DRD3P35462 400 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 PMS1P54277 932 aaKnown RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 UCNP55089 124 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 KRT83P78385 493 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 DAB2P98082 770 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ZNF177Q13360 481 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 TBC1D25Q3MII6 688 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ACCSLQ4AC99 568 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 EFHC1Q5JVL4 640 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 PRAMEF14Q5SWL7 426 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 BROXQ5VW32 411 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 SYPL2Q5VXT5 272 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 MMS22LQ6ZRQ5 1243 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 RRAGAQ7L523 313 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 GPR155Q7Z3F1 870 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ZSCAN30Q86W11 494 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ELOA2Q8IYF1 753 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 CCAR2Q8N163 923 aaKnown RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 DCBLD1Q8N8Z6 715 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 LMO3Q8TAP4 145 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 FRS2Q8WU20 508 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 RPRD1AQ96P16 312 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 FCRL3Q96P31 734 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 BBC3Q96PG8 261 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ZSWIM1Q9BR11 485 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 C2orf49Q9BVC5 232 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 DYRK4Q9NR20 520 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 KLHL11Q9NVR0 708 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ASNSD1Q9NWL6 643 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 DDIT4Q9NX09 232 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 ZDHHC9Q9Y397 364 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 PAXBP1Q9Y5B6 917 aa8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 TDRD6O60522 2096 aaKnown RBP8.25□□□□□ -1.09
NIF3L1-209ENST00000454952 TRPM6Q9BX84 2022 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 TRIM49BA6NDI0 452 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 BHMG1C9JSJ3 638 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 E5RJQ4 531 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 CBX4O00257 560 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 THAP12O43422 761 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 BRINP1O60477 761 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 RTN2O75298 545 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 CLDN11O75508 207 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 AFPP02771 609 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 PRNPP04156 253 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 GP1BAP07359 652 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 GNA15P30679 374 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 AKT2P31751 481 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 STK19P49842 368 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 DUSP3P51452 185 aaPredicted RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 PPP2CBP62714 309 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 PPP2CAP67775 309 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 KCNH2Q12809 1159 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 CNTN1Q12860 1018 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 PDCLQ13371 301 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 DLG2Q15700 870 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 AGBL4Q5VU57 503 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 DENND1BQ6P3S1 775 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 KANSL1Q7Z3B3 1105 aa8.24□□□□□ -1.09
NIF3L1-209ENST00000454952 SPATS2Q86XZ4 545 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms