RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 COILP38432 576 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 GEMIN4P57678 1058 aaKnown RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 IFI35P80217 286 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 LMNB2Q03252 620 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 SLC20A2Q08357 652 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 HNRNPDQ14103 355 aaKnown RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 RFTN1Q14699 578 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 INO80DQ53TQ3 878 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 PITRM1Q5JRX3 1037 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 GRAMD4Q6IC98 578 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 METTL3Q86U44 580 aaKnown RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ADIPOR2Q86V24 386 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 CCDC13Q8IYE1 715 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ATPAF2Q8N5M1 289 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 TEX26Q8N6G2 289 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 TERB1Q8NA31 727 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 KDM1BQ8NB78 822 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 OR7D4Q8NG98 312 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ATL2Q8NHH9 583 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 C1orf54Q8WWF1 131 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ATG4AQ8WYN0 398 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 BHMTQ93088 406 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 MAGOHBQ96A72 148 aaKnown RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 PNKPQ96T60 521 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 AP1M1Q9BXS5 423 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 MUC3BQ9H195 1237 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 USP29Q9HBJ7 922 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ATP13A1Q9HD20 1204 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ABCB8Q9NUT2 735 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 STARD13Q9Y3M8 1113 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 CTAGE15A4D2H0 777 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 SHISA7A6NL88 538 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 SPECC1L-ADORA2AF8WAN1 911 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 DFFAO00273 331 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 CD160O95971 181 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 ASLP04424 464 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 CTAGE8P0CG41 777 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 GRIA2P42262 883 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 SLC6A11P48066 632 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 CLCN6P51797 869 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 ARF5P84085 180 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 DHX34Q14147 1143 aaKnown RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 E2F5Q15329 346 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 GEN1Q17RS7 908 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 FUT11Q495W5 492 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 TMEM215Q68D42 235 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 RETSATQ6NUM9 610 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 TTC27Q6P3X3 843 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 ARHGAP36Q6ZRI8 547 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 ADAT2Q7Z6V5 191 aaKnown RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 CTAGE6Q86UF2 777 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 ZC3H18Q86VM9 953 aaKnown RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 UBALD2Q8IYN6 164 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 APCDD1Q8J025 514 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 MMGT1Q8N4V1 131 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 ALLCQ8N6M5 410 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 NAT16Q8N8M0 369 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 HTR3CQ8WXA8 447 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 LGMNQ99538 433 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 IL12RB2Q99665 862 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 FERMT1Q9BQL6 677 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 RRAGDQ9NQL2 400 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 RBM12Q9NTZ6 932 aaKnown RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 WNT16Q9UBV4 365 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 VPS51Q9UID3 782 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 HS3ST2Q9Y278 367 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 NEU2Q9Y3R4 380 aa11.49□□□□□ -0.57
TRAF4-206ENST00000454852 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-206ENST00000454852 MYO10Q9HD67 2058 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 H7C0C1 242 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 NPC1O15118 1278 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 NARSO43776 548 aaKnown RBP11.48□□□□□ -0.57
TRAF4-206ENST00000454852 GCATO75600 419 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 KAT7O95251 611 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 SRPRAP08240 638 aaKnown RBP11.48□□□□□ -0.57
TRAF4-206ENST00000454852 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-206ENST00000454852 VAV1P15498 845 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 RBL1P28749 1068 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 PTGIRP43119 386 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 TNFRSF4P43489 277 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 ATP5OP48047 213 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 TUBB4BP68371 445 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 PRKCQQ04759 706 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 WASHC5Q12768 1159 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 P3H1Q32P28 736 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 TMEM196Q5HYL7 178 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 HEATR6Q6AI08 1181 aaKnown RBP11.48□□□□□ -0.57
TRAF4-206ENST00000454852 IL31Q6EBC2 164 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 ALG1LQ6GMV1 187 aa11.48□□□□□ -0.57
TRAF4-206ENST00000454852 DARS2Q6PI48 645 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms