RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 CCDC117Q8IWD4 279 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 DEFB106AQ8N104 65 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 TMEM86AQ8N2M4 240 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 RBM15BQ8NDT2 890 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 PIP4K2CQ8TBX8 421 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 KCNV2Q8TDN2 545 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 C18orf25Q96B23 403 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 FAM136AQ96C01 138 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 P2RY11Q96G91 374 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 ZNF184Q99676 751 aaPredicted RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 RBBP8Q99708 897 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 RAB6CQ9H0N0 254 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 C12orf65Q9H3J6 166 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 DDX43Q9NXZ2 648 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 IL1RAPL1Q9NZN1 696 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 BFARQ9NZS9 450 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 PDP2Q9P2J9 529 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 COPG2Q9UBF2 871 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 BCAP29Q9UHQ4 241 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 SCOCQ9UIL1 159 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 NUMBLQ9Y6R0 609 aa10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 ZNF638Q14966 1978 aaKnown RBP10.81□□□□□ -0.68
GTF3C2-206ENST00000454704 PATJQ8NI35 1801 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 WDR27A2RRH5 827 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 SLCO1B7G3V0H7 640 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 H0Y3Z8 333 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 EEF2KO00418 725 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 PIK3R2O00459 728 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 TPP1O14773 563 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 DCLK1O15075 740 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 MFSD11O43934 449 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 CCNT2O60583 730 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 GPR32O75388 356 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 RECQL4O94761 1208 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 ALDOAP04075 364 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 COL6A2P12110 1019 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 LCP1P13796 627 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 GOT1P17174 413 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 NPR3P17342 541 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 PLA2G5P39877 138 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 COPAP53621 1224 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 LIMK2P53671 638 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 ABCE1P61221 599 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 COG7P83436 770 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 BTKQ06187 659 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 PPIDQ08752 370 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 THOC5Q13769 683 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 PDE1CQ14123 709 aaPredicted RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 GPNMBQ14956 572 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 PCLAFQ15004 111 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 DENND5BQ6ZUT9 1274 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 LRRC8DQ7L1W4 858 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 LINC00523Q86TU6 105 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 TMEM135Q86UB9 458 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 KLHDC8BQ8IXV7 354 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 ULK2Q8IYT8 1036 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 KIRREL3Q8IZU9 778 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 SCML4Q8N228 414 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 MPP5Q8N3R9 675 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 NME8Q8N427 588 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 CCDC33Q8N5R6 958 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 CCDC185Q8N715 623 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 B3GALNT2Q8NCR0 500 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 OR6Y1Q8NGX8 325 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 GDPD5Q8WTR4 605 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 SCG3Q8WXD2 468 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 HDAC11Q96DB2 347 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 SPDL1Q96EA4 605 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 ZMAT2Q96NC0 199 aaKnown RBP10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 TRAPPC9Q96Q05 1148 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 MECRQ9BV79 373 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 C1QTNF1Q9BXJ1 281 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 FAM192AQ9GZU8 254 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 LRRC4Q9HBW1 653 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 CASS4Q9NQ75 786 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 CNGB3Q9NQW8 809 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 NDE1Q9NXR1 346 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 HACD3Q9P035 362 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 NME7Q9Y5B8 376 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 PCDHB12Q9Y5F1 795 aa10.8□□□□□ -0.68
GTF3C2-206ENST00000454704 MYO18AQ92614 2054 aaKnown RBP10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 TBX10O75333 385 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 PIAS1O75925 651 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 KRT36O76013 467 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 GSRP00390 522 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 F2P00734 622 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 RPLP2P05387 115 aaKnown RBP10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 ZNF286BP0CG31 522 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 RALBP11234 206 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 SELPP16109 830 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 MGAT1P26572 445 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 ADORA2BP29275 332 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 CRABP2P29373 138 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 TYK2P29597 1187 aa10.79□□□□□ -0.68
GTF3C2-206ENST00000454704 ABL2P42684 1182 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms