RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 EPHB2P29323 1055 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 NUMBP49757 651 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 KRT83P78385 493 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 GNA12Q03113 381 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 CA9Q16790 459 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 HNRNPA1L2Q32P51 320 aaKnown RBP20.44■□□□□ 0.86
COL9A3-202ENST00000452372 PPM1JQ5JR12 505 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 TCEAL6Q6IPX3 200 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 ZNF366Q8N895 744 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 SLC35G2Q8TBE7 412 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 TCEAL3Q969E4 200 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 ERLEC1Q96DZ1 483 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 RPL10LQ96L21 214 aaKnown RBP20.44■□□□□ 0.86
COL9A3-202ENST00000452372 MRGPRX1Q96LB2 322 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 PSMB7Q99436 277 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 C2orf49Q9BVC5 232 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-202ENST00000452372 NDFIP2Q9NV92 336 aa20.44■□□□□ 0.86
COL9A3-202ENST00000452372 WASH4PA8MWX3 477 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 RHOBTB1O94844 696 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 PROSCO94903 275 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 ADRB1P08588 477 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 TCF4P15884 667 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 NDUFV2P19404 249 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 CYLC1P35663 651 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-202ENST00000452372 NNMTP40261 264 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 MAGEA1P43355 309 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 STK19P49842 368 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-202ENST00000452372 COPAP53621 1224 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 AASDHQ4L235 1098 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-202ENST00000452372 TMPRSS6Q8IU80 811 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 RHOT2Q8IXI1 618 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 SPC24Q8NBT2 197 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 OR7D4Q8NG98 312 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 MKRN2Q9H000 416 aaKnown RBP20.43■□□□□ 0.86
COL9A3-202ENST00000452372 CATSPERBQ9H7T0 1116 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 FBRSQ9HAH7 460 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 PRDM16Q9HAZ2 1276 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 OSGEPQ9NPF4 335 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 PRSS16Q9NQE7 514 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 VPS45Q9NRW7 570 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 DNAI1Q9UI46 699 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 SLC25A13Q9UJS0 675 aa20.43■□□□□ 0.86
COL9A3-202ENST00000452372 EPN1Q9Y6I3 576 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-202ENST00000452372 MAP1BP46821 2468 aaKnown RBP20.43■□□□□ 0.86
COL9A3-202ENST00000452372 TARSL2A2RTX5 802 aaKnown RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 TTC34A8MYJ7 566 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 FGF10O15520 208 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 MTA2O94776 668 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 C7P10643 843 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 ZNF135P52742 658 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 TPI1P60174 286 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 BYSLQ13895 437 aaKnown RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 TCEAL1Q15170 157 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 STPG1Q5TH74 334 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 PMS2CLQ68D20 193 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 METTL3Q86U44 580 aaKnown RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 FRMD1Q8N878 549 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 RTL3Q8N8U3 475 aaKnown RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 DCAF4L2Q8NA75 395 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 OR2T3Q8NH03 318 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 CNTNAP3BQ96NU0 1288 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 KCTD15Q96SI1 283 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-202ENST00000452372 SPON2Q9BUD6 331 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 CNTNAP3Q9BZ76 1288 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 SLC6A17Q9H1V8 727 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 MAGEH1Q9H213 219 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 VPS51Q9UID3 782 aa20.42■□□□□ 0.86
COL9A3-202ENST00000452372 EDDM13A0A1B0GTR0 161 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 EEF2KO00418 725 aaKnown RBP20.41■□□□□ 0.86
COL9A3-202ENST00000452372 ATP9BO43861 1147 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 SNAP91O60641 907 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 RARAP10276 462 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 ETFBP38117 255 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 P2RY2P41231 377 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 HCAR3P49019 387 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 CREB5Q02930 508 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 SLC25A11Q02978 314 aaKnown RBP20.41■□□□□ 0.86
COL9A3-202ENST00000452372 SPA17Q15506 151 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 ELF2Q15723 593 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 MAP7D1Q3KQU3 841 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 KCNT1Q5JUK3 1230 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 C11orf74Q86VG3 221 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 C12orf50Q8NA57 414 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-202ENST00000452372 TEKT4Q8WW24 435 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 RLN3Q8WXF3 142 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 RFFLQ8WZ73 363 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 ACE2Q9BYF1 805 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-202ENST00000452372 MTG2Q9H4K7 406 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 ZWILCHQ9H900 591 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 ATP13A1Q9HD20 1204 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 DONSONQ9NYP3 566 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 HS3ST2Q9Y278 367 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 PCDHA13Q9Y5I0 950 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 KMT2BQ9UMN6 2715 aaPredicted RBP20.41■□□□□ 0.86
COL9A3-202ENST00000452372 PLXND1Q9Y4D7 1925 aa20.41■□□□□ 0.86
COL9A3-202ENST00000452372 SOWAHDA6NJG2 315 aa20.4■□□□□ 0.86
COL9A3-202ENST00000452372 RAMP2O60895 175 aa20.4■□□□□ 0.86
COL9A3-202ENST00000452372 SIN3BO75182 1162 aa20.4■□□□□ 0.86
COL9A3-202ENST00000452372 ZNF217O75362 1048 aa20.4■□□□□ 0.86
COL9A3-202ENST00000452372 ZMPSTE24O75844 475 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms