RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 CHP2O43745 196 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 CDC40O60508 579 aaKnown RBP eCLIP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 RTN3O95197 1032 aaPredicted RBP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 S100A9P06702 114 aaKnown RBP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 VIL1P09327 827 aaKnown RBP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 CTNNB1P35222 781 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 OMPP47874 163 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 TAB1Q15750 504 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 MZT2AQ6P582 158 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 FNDC5Q8NAU1 212 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 GLIS3Q8NEA6 775 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 PMM1Q92871 262 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 APOL4Q9BPW4 351 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 CNGB3Q9NQW8 809 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 ABI3Q9P2A4 366 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 ACOT9Q9Y305 439 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 UBE2QL1A1L167 161 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 EFCAB10A6NFE3 127 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 MDH1P40925 334 aaKnown RBP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 GPAT3Q53EU6 434 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 LRIG3Q6UXM1 1119 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 ZNF621Q6ZSS3 439 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 SLC47A2Q86VL8 602 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 USP38Q8NB14 1042 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 OR10H5Q8NGA6 315 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 ZFP28Q8NHY6 868 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 MTFMTQ96DP5 389 aaKnown RBP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 MCCC2Q9HCC0 563 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 RBM22Q9NW64 420 aaKnown RBP eCLIP8.41□□□□□ -1.06
SEC22C-211ENST00000451653 NCKIPSDQ9NZQ3 722 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 SNCAIPQ9Y6H5 919 aa8.41□□□□□ -1.06
SEC22C-211ENST00000451653 TMEM120BA0PK00 339 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 NKRFO15226 690 aaKnown RBP eCLIP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 OGTO15294 1046 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SLITRK3O94933 977 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 NFKB1P19838 968 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 EIF2S3P41091 472 aaKnown RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 BCAP31P51572 246 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 PGBD2Q6P3X8 592 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 OR10G6Q8NH81 332 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SEPHS2Q99611 448 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SPATA9Q9BWV2 254 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 FRMD8P1Q9BZ68 369 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 UBP1Q9NZI7 540 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 GULP1Q9UBP9 304 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 PLAGL2Q9UPG8 496 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 AP4E1Q9UPM8 1137 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 CARNS1A5YM72 827 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SLCO1B7G3V0H7 640 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 H3BNH8 94 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 RASGRP1O95267 797 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 MED26O95402 600 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 LTFP02788 710 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 RPA3P35244 121 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 TGFBR2P37173 567 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 TUFMP49411 452 aaKnown RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 OTUD4Q01804 1114 aaKnown RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 ARMC12Q5T9G4 340 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 RAET1GQ6H3X3 334 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 PLEKHA7Q6IQ23 1121 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 LRP10Q7Z4F1 713 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 GPR135Q8IZ08 494 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 DAW1Q8N136 415 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 TDRD5Q8NAT2 981 aaKnown RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 OR5T3Q8NGG3 340 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 GRIN3AQ8TCU5 1115 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 GAL3ST3Q96A11 431 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SEC16BQ96JE7 1060 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 ROPN1BQ9BZX4 212 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 DSN1Q9H410 356 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 ROPN1Q9HAT0 212 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 RASSF1Q9NS23 344 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 INTS10Q9NVR2 710 aaKnown RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 FAM153AQ9UHL3 310 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 STARD13Q9Y3M8 1113 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 TISP43B9A030 160 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 KPNA5O15131 536 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 TPP2P29144 1249 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SERPINA4P29622 427 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 IL17AQ16552 155 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 SERPINA13PQ6UXR4 307 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 ZNF571Q7Z3V5 609 aaPredicted RBP8.4□□□□□ -1.06
SEC22C-211ENST00000451653 EXOC3L1Q86VI1 746 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 ERO1BQ86YB8 467 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 ARMC8Q8IUR7 673 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 FBXO39Q8N4B4 442 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 TAS1R2Q8TE23 839 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 PPP1R13LQ8WUF5 828 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 RUBCNQ92622 972 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 OSGEPQ9NPF4 335 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 XPNPEP3Q9NQH7 507 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 GPATCH2LQ9NWQ4 482 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 FMN2Q9NZ56 1722 aa8.4□□□□□ -1.06
SEC22C-211ENST00000451653 LTN1O94822 1766 aa8.4□□□□□ -1.07
SEC22C-211ENST00000451653 TRAV19A0A0A6YYK7 116 aa8.4□□□□□ -1.07
SEC22C-211ENST00000451653 CD3EAPO15446 510 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms