RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 GRM5P41594 1212 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 NUDT2P50583 147 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 CDK7P50613 346 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 BCAT1P54687 386 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 PKNOX1P55347 436 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 MED21Q13503 144 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 LIN52Q52LA3 116 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 FAM219BQ5XKK7 198 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 SPATA31D4Q6ZUB0 917 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 ARMCX2Q7L311 632 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 TDRD5Q8NAT2 981 aaKnown RBP11.75□□□□□ -0.53
TNXB-203ENST00000451343 ANKRD52Q8NB46 1076 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 SLC10A4Q96EP9 437 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 SORCS3Q9UPU3 1222 aa11.75□□□□□ -0.53
TNXB-203ENST00000451343 MYOCOSA0A1B0GUC4 107 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 CFLARO15519 480 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 PHGDHO43175 533 aaKnown RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 JUNP05412 331 aaKnown RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 VCLP18206 1134 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 MX2P20592 715 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 GRK2P25098 689 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 HOXA11P31270 313 aaPredicted RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 GNL1P36915 607 aaPredicted RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 MMEL1Q495T6 779 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 AAGABQ6PD74 315 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 ACAD11Q709F0 780 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 SNX32Q86XE0 403 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 APLFQ8IW19 511 aaPredicted RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 SPATA6LQ8N4H0 392 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 USP13Q92995 863 aaPredicted RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 CMTM5Q96DZ9 223 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 GATA5Q9BWX5 397 aaPredicted RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 CDH19Q9H159 772 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 SSX2IPQ9Y2D8 614 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 INPP5FQ9Y2H2 1132 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 PCDHB12Q9Y5F1 795 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 SBF1O95248 1867 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 I6L893 689 aaPredicted RBP11.74□□□□□ -0.53
TNXB-203ENST00000451343 RECQL4O94761 1208 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 MATKP42679 507 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 FBXW8Q8N3Y1 598 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 SNX27Q96L92 541 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 OSMRQ99650 979 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 RBBP8Q99708 897 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 BPTFQ12830 3046 aa11.74□□□□□ -0.53
TNXB-203ENST00000451343 STX16-NPEPL1H3BU86 382 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 STAU1O95793 577 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 C2P06681 752 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 UQCRBP14927 111 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ARSAP15289 507 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 BTKQ06187 659 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 HNRNPDQ14103 355 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 STXBP5Q5T5C0 1151 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ARHGAP17Q68EM7 881 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 EPGNQ6UW88 154 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 CATSPER4Q7RTX7 472 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SATL1Q86VE3 508 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SPATA16Q9BXB7 569 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 NUF2Q9BZD4 464 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 CHRAC1Q9NRG0 131 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 IARS2Q9NSE4 1012 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SETD4Q9NVD3 440 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SLC39A10Q9ULF5 831 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ATP5BP06576 529 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 GJA5P36382 358 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 GARSP41250 739 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 MRPS22P82650 360 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 ZNF460Q14592 562 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 MARCH8Q5T0T0 291 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 CYS1Q717R9 158 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 NPWQ8N729 165 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNXB-203ENST00000451343 CPNE1Q99829 537 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SIKE1Q9BRV8 207 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SNX25Q9H3E2 840 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 TCF7L2Q9NQB0 619 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 VANGL2Q9ULK5 521 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ARHGAP26Q9UNA1 814 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 NUP205Q92621 2012 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ZCWPW2A0A1B0GU75 182 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ZNF487B1APH4 448 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 H3BRB1 525 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 EEF2KO00418 725 aaKnown RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 PTPN3P26045 913 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SERPINB8P50452 374 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 THOP1P52888 689 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
TNXB-203ENST00000451343 GK3PQ14409 553 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 PDK1Q15118 436 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 PDK3Q15120 406 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 GRIK4Q16099 956 aa11.73□□□□□ -0.53
TNXB-203ENST00000451343 ZDHHC17Q8IUH5 632 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms