RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 NTN3O00634 580 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 SLC7A4O43246 635 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 PRAMEF10O60809 474 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 SIN3BO75182 1162 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 CNTN5O94779 1100 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 KLKB1P03952 638 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 CD33P20138 364 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 HOXD9P28356 352 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 CORO1AP31146 461 aaKnown RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 CCKBRP32239 447 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF131P52739 623 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 GTF2BQ00403 316 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 TRIM29Q14134 588 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 FGL2Q14314 439 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 MPPE1Q53F39 396 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 C10orf120Q5SQS8 335 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 MBLAC2Q68D91 279 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 CRTC1Q6UUV9 634 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 RUFY3Q7L099 469 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 KIAA0907Q7Z7F0 614 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 MMAAQ8IVH4 418 aaKnown RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 FAM217AQ8IXS0 508 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 AADATQ8N5Z0 425 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF557Q8N988 423 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 KDM1BQ8NB78 822 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF548Q8NEK5 533 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 FAM131CQ96AQ9 280 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 TMEM74Q96NL1 305 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 TSPAN10Q9H1Z9 355 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 SYNDIG1Q9H7V2 258 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 PARVGQ9HBI0 331 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 PRDM8Q9NQV8 689 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 RBAKQ9NYW8 714 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 AGO1Q9UL18 857 aaKnown RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 SCN8AQ9UQD0 1980 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ESPL1Q14674 2120 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ANKHD1Q8IWZ3 2542 aaKnown RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 RP1P56715 2156 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 TARSL2A2RTX5 802 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 SHISA8B8ZZ34 492 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 TISP43B9A030 160 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 TPP1O14773 563 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 MUSKO15146 869 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 PLRG1O43660 514 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 NEBLO76041 1014 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 FAM13AO94988 1023 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 LDHAP00338 332 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 ASLP04424 464 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 RARGP13631 454 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 HGFP14210 728 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 POLR2EP19388 210 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 AMPD1P23109 780 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 MAT2AP31153 395 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 PSMD8P48556 350 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 PGFP49763 221 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 SLC12A3P55017 1021 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 PERM1Q5SV97 790 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 TMEM164Q5U3C3 297 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 DYMQ7RTS9 669 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 B3GNT8Q7Z7M8 397 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 ZFAND4Q86XD8 727 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 DCP2Q8IU60 420 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF276Q8N554 614 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 MYCT1Q8N699 235 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 TSEN2Q8NCE0 465 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 APOBEC4Q8WW27 367 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 CCDC3Q9BQI4 270 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 MRPL45Q9BRJ2 306 aaKnown RBP8.17□□□□□ -1.1
LINC01961-201ENST00000449954 FAM213AQ9BRX8 229 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 MED10Q9BTT4 135 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 CALN1Q9BXU9 219 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 DPEP3Q9H4B8 488 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 CASS4Q9NQ75 786 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 KRT82Q9NSB4 513 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 OSER1Q9NX31 292 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 SCML2Q9UQR0 700 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 LOXL2Q9Y4K0 774 aa8.17□□□□□ -1.1
LINC01961-201ENST00000449954 PRRC2CQ9Y520 2896 aaKnown RBP8.16□□□□□ -1.1
LINC01961-201ENST00000449954 EFCAB7A8K855 629 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 A8MXQ7 604 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 MDM4O15151 490 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 LDLRP01130 860 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 TNNC2P02585 160 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 NME1P15531 152 aaKnown RBP8.16□□□□□ -1.1
LINC01961-201ENST00000449954 ITGB7P26010 798 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 ELAVL3Q14576 367 aaKnown RBP8.16□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF174Q15697 407 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 HYIQ5T013 277 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 DENND1CQ8IV53 801 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 OR13H1Q8NG92 308 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 CPT1CQ8TCG5 803 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 HVCN1Q96D96 273 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 MYO19Q96H55 970 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms