RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RIMS3Q9UJD0 308 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 PCNTO95613 3336 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 C1orf232A0A0U1RR37 186 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 GLTPD2A6NH11 291 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 E7ESA3 106 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 CHADO15335 359 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZSCAN5DPP0CG00 497 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZNF792Q3KQV3 632 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 CCDC14Q49A88 953 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SIGIRRQ6IA17 410 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 TTC23LQ6PF05 361 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 FAM20CQ8IXL6 584 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SLC44A1Q8WWI5 657 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SERPINI1Q99574 410 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SLC7A5P2Q9GIP4 190 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 TXNDC16Q9P2K2 825 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 PACSIN3Q9UKS6 424 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 SATB2Q9UPW6 733 aa13.72□□□□□ -0.21
SYNGAP1-204ENST00000449372 LOC105371267A0A1B0GV96 52 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 H3BMQ9 156 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 GAS2O43903 313 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 APOC2P02655 101 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 C8BP07358 591 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 ITGAXP20702 1163 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 TUBA1BP68363 451 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 TAPT1Q6NXT6 567 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 TUBA1AQ71U36 451 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 GOLM1Q8NBJ4 401 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 OR5B17Q8NGF7 314 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 COPS5Q92905 334 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 SERAC1Q96JX3 654 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 COG8Q96MW5 612 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 SNX25Q9H3E2 840 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 PDGFCQ9NRA1 345 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 MID2Q9UJV3 735 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZNF236Q9UL36 1845 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 CALCAP01258 141 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 UBL4AP11441 157 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 CDKN2BP42772 138 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 EFNA5P52803 228 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 STX3Q13277 289 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 PEX6Q13608 980 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 CHI3L2Q15782 390 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 CCSAPQ6IQ19 270 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 ZBTB8OSQ8IWT0 167 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 ELMOD1Q8N336 334 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 LINC01465Q8N7H1 131 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 ATP6V0D2Q8N8Y2 350 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 RNF38Q9H0F5 515 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 B3GNT3Q9Y2A9 372 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 AP4S1Q9Y587 144 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 GARSP41250 739 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 DYNLT1P63172 113 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 SLC18A2Q05940 514 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 OXA1LQ15070 435 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 DUOXA2Q1HG44 320 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 CXorf21Q9HAI6 301 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 OLAHQ9NV23 265 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.21
SYNGAP1-204ENST00000449372 TPTEP56180 551 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 FXNQ16595 210 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 AARS2Q5JTZ9 985 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 GPR107Q5VW38 600 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 ANKRD26P1Q6NSI1 321 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 LILRA2Q8N149 483 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 PPM1NQ8N819 430 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 CMTM5Q96DZ9 223 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 FAR2Q96K12 515 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 TMEM79Q9BSE2 394 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 PNPLA3Q9NST1 481 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 SLC45A1Q9Y2W3 748 aa13.71□□□□□ -0.22
SYNGAP1-204ENST00000449372 EVPLQ92817 2033 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 GOLGA8QA0A0J9YX86 632 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 GOLGA8OA6NCC3 632 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 GOLGA8CPA6NN73 597 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 GOLGA8NF8WBI6 632 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 PRKACBP22694 351 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 TNFSF9P41273 254 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 ZNF132P52740 706 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 BRSK2Q8IWQ3 736 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 CPSF7Q8N684 471 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 PKP2Q99959 881 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 PSD2Q9BQI7 771 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 DHRS4Q9BTZ2 278 aa13.7□□□□□ -0.22
SYNGAP1-204ENST00000449372 TDRD1Q9BXT4 1180 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms