RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 C2CD2LO14523 706 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 KRT37O76014 449 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 JCHAINP01591 159 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CNTFP26441 200 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 IFNAR2P48551 515 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MAPKAPK2P49137 400 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NPY2RP49146 381 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 IL9RQ01113 521 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 RAB33AQ14088 237 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 HECTD3Q5T447 861 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CASC4Q6P4E1 433 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 UNC5AQ6ZN44 842 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MICALCLQ6ZW33 695 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CPLX4Q7Z7G2 160 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NETO2Q8NC67 525 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF473Q8WTR7 871 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NSMCE1Q8WV22 266 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 DPF3Q92784 378 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TTC17Q96AE7 1141 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MTBPQ96DY7 904 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TRMT2BQ96GJ1 504 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MYRFLQ96LU7 910 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 AGAP3Q96P47 875 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 YME1L1Q96TA2 773 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 IL12RB2Q99665 862 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 VN1R3Q9BXE9 311 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CEP41Q9BYV8 373 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC39A8Q9C0K1 460 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MRPL17Q9NRX2 175 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 VANGL2Q9ULK5 521 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 NR2E3Q9Y5X4 410 aa10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 MRPL42Q9Y6G3 142 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-203ENST00000448935 TRIM43BA6NCK2 446 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 DRGXA6NNA5 263 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ADAM12O43184 909 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 CACNG3O60359 315 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 MAFKO60675 156 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 KRT38O76015 456 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ZWINTO95229 277 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 F12P00748 615 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 MT-ND3P03897 115 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 POLBP06746 335 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 HSPA8P11142 646 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 NFKB1P19838 968 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 SLC11A2P49281 568 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 HARS2P49590 506 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 RENBPP51606 427 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 GEMP55040 296 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 YBEYP58557 167 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 DEFB103AP81534 67 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ZBTB17Q13105 803 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 PLD1Q13393 1074 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 MTM1Q13496 603 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 HNRNPDQ14103 355 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 FRG1Q14331 258 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 SPANXN3Q5MJ09 141 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 TTC39BQ5VTQ0 682 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 KCTD11Q693B1 232 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 C14orf80Q86SX3 495 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 CHSY1Q86X52 802 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 CTAGE3PQ8IX95 158 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 KLHDC8BQ8IXV7 354 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF683Q8IZ20 524 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 AGGF1Q8N302 714 aaeCLIP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ANKRD42Q8N9B4 389 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 DNAAF3Q8N9W5 541 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 DEPDC1BQ8WUY9 529 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 AZIN2Q96A70 460 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 TRIM43Q96BQ3 446 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 PLD4Q96BZ4 506 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 MRRFQ96E11 262 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 FCRL5Q96RD9 977 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 PRMT1Q99873 361 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 CASS4Q9NQ75 786 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 HAUS2Q9NVX0 235 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 YIPF1Q9Y548 306 aa10.79□□□□□ -0.68
VIPAS39-203ENST00000448935 ZNF840PA6NDX5 716 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM159BA6NKW6 160 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 F5H5T6 163 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 PRRG1O14668 218 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 FAM155BO75949 473 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 ALDH1A2O94788 518 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 TBX18O95935 607 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 SNRPAP09012 282 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 CA4P22748 312 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 MGAT1P26572 445 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 CD68P34810 354 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 GRIA1P42261 906 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 PAPOLAP51003 745 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 SEC24CP53992 1094 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 EPHB3P54753 998 aa10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 SESN2P58004 480 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-203ENST00000448935 CDH17Q12864 832 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms