RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GALCP54803 685 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 FAM183BPQ6ZVS7 135 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 PHF13Q86YI8 300 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 SCUBE3Q8IX30 993 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 CCDC170Q8IYT3 715 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 MCOLN2Q8IZK6 566 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 GALNT15Q8N3T1 639 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 ARHGEF26Q96DR7 871 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 ISCUQ9H1K1 167 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 FBXL12Q9NXK8 326 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 TPX2Q9ULW0 747 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 SNX11Q9Y5W9 270 aa14.17□□□□□ -0.14
PDLIM2-213ENST00000448520 APC2O95996 2303 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 ARHGAP6O43182 974 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 TNFSF14O43557 240 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 DKK1O94907 266 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 FSBPO95073 299 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 LCA5LO95447 670 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 SRPRAP08240 638 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 GZMAP12544 262 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 RRM1P23921 792 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 GRK6P43250 576 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 RACK1P63244 317 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 TAF5Q15542 800 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 HNRNPA1L2Q32P51 320 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 KIAA0895LQ68EN5 471 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 ADAT2Q7Z6V5 191 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 TMEM110Q86TL2 294 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 XYLT1Q86Y38 959 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 GANCQ8TET4 914 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 STK32AQ8WU08 396 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 ZNF653Q96CK0 615 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 FCRL2Q96LA5 508 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 NOX5Q96PH1 765 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 THAP2Q9H0W7 228 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 PABPC3Q9H361 631 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 SYNCQ9H7C4 482 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 ADAM22Q9P0K1 906 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 MYO1AQ9UBC5 1043 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 PCDHA13Q9Y5I0 950 aa14.16□□□□□ -0.14
PDLIM2-213ENST00000448520 SPEGQ15772 3267 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 LRRC72A6NJI9 287 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 CAPN9O14815 690 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 VILLO15195 856 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 GRAP2O75791 330 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 FYNP06241 537 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 ATXN1LP0C7T5 689 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 CSKP41240 450 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 MAGEA1P43355 309 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 CCT8P50990 548 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 C21orf59P57076 290 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 RPS24P62847 133 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 CDH18Q13634 790 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 SPA17Q15506 151 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 INAVAQ3KP66 663 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 MS4A13Q5J8X5 152 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 NADSYN1Q6IA69 706 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 DQX1Q8TE96 717 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 FAM149B1Q96BN6 582 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 C18orf8Q96DM3 657 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 MYO19Q96H55 970 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 ACE2Q9BYF1 805 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 TOR4AQ9NXH8 423 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 DKK4Q9UBT3 224 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 TRIM10Q9UDY6 481 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 SLC12A6Q9UHW9 1150 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 INTS6Q9UL03 887 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 NAALADL1Q9UQQ1 740 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 ADGRG1Q9Y653 693 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 WDFY3Q8IZQ1 3526 aa14.15□□□□□ -0.14
PDLIM2-213ENST00000448520 DSPP15924 2871 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 ADAMTS20P59510 1910 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 A0A1W2PPC4 97 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 TCRBV5S1A1TA0A578 114 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 SIN3BO75182 1162 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 APOEP02649 317 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 H2AFZP0C0S5 128 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 NNMTP40261 264 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 CTSKP43235 329 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 GABRB2P47870 512 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 ECT2LQ008S8 904 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 SLC12A1Q13621 1099 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 CST6Q15828 149 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 DCAF6Q58WW2 860 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 C9orf64Q5T6V5 341 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 TRNP1Q6NT89 227 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 OLFML1Q6UWY5 402 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 H2AFVQ71UI9 128 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 OR2T34Q8NGX1 318 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 BTN2A3PQ96KV6 586 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 MRGPRX3Q96LB0 322 aa14.14□□□□□ -0.15
PDLIM2-213ENST00000448520 OMDQ99983 421 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms