RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TOP3BO95985 862 aaKnown RBP17.8■□□□□ 0.44
SMC6-206ENST00000446852 IGLV3-27P01718 113 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 HLA-DQB2P05538 268 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 ZDHHC11BP0C7U3 371 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 CNTFP26441 200 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 MICALL1Q8N3F8 863 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 C2orf15Q8WU43 125 aaKnown RBP17.8■□□□□ 0.44
SMC6-206ENST00000446852 MFSD3Q96ES6 412 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 BTN2A3PQ96KV6 586 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 FCRL5Q96RD9 977 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 ZYG11BQ9C0D3 744 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 IQCGQ9H095 443 aaKnown RBP17.8■□□□□ 0.44
SMC6-206ENST00000446852 CWH43Q9H720 699 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 GLOD4Q9HC38 313 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 TMEM51Q9NW97 253 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 ZFATQ9P243 1243 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 PLLPQ9Y342 182 aa17.8■□□□□ 0.44
SMC6-206ENST00000446852 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 SLC38A8A6NNN8 435 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 USP1O94782 785 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 ALDOAP04075 364 aaKnown RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 SCTRP47872 440 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 SERPINB4P48594 390 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 ALDH7A1P49419 539 aaKnown RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 NAB1Q13506 487 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 ANKRD20A4Q4UJ75 823 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 RAP1GAP2Q684P5 730 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 NAPEPLDQ6IQ20 393 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 SLC8B1Q6J4K2 584 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 TIFABQ6ZNK6 161 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 NDUFAF2Q8N183 169 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 UMODL1-AS1Q8N2C9 162 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMC6-206ENST00000446852 IGSF8Q969P0 613 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 MANSC1Q9H8J5 431 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 IPO11Q9UI26 975 aaKnown RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 IGLV3-10A0A075B6K4 115 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 SLC12A8A0AV02 714 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 RHOQP17081 205 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 NPY2RP49146 381 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 RPL10AP62906 217 aaKnown RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 CDH17Q12864 832 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 ATP6V0D2Q8N8Y2 350 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 ZNF784Q8NCA9 323 aaPredicted RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 IL22Q9GZX6 179 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 PPARGC1AQ9UBK2 798 aaKnown RBP17.79■□□□□ 0.44
SMC6-206ENST00000446852 CAPN7Q9Y6W3 813 aa17.79■□□□□ 0.44
SMC6-206ENST00000446852 FAM237BA0A1B0GVD1 139 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 TLR5O60602 858 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 PEX11BO96011 259 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 F7P08709 466 aaPredicted RBP17.78■□□□□ 0.44
SMC6-206ENST00000446852 OR1D2P34982 312 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 TIGD7Q6NT04 549 aaPredicted RBP17.78■□□□□ 0.44
SMC6-206ENST00000446852 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
SMC6-206ENST00000446852 PPM1EQ8WY54 764 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 OXCT2Q9BYC2 517 aaPredicted RBP17.78■□□□□ 0.44
SMC6-206ENST00000446852 RBM22Q9NW64 420 aaKnown RBP eCLIP17.78■□□□□ 0.449e-20■■■■■ 33.3
SMC6-206ENST00000446852 TMEM248Q9NWD8 314 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 FNIP2Q9P278 1114 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 KLHL14Q9P2G3 628 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 AAR2Q9Y312 384 aaKnown RBP17.78■□□□□ 0.44
SMC6-206ENST00000446852 PARNO95453 639 aaKnown RBP17.78■□□□□ 0.44
SMC6-206ENST00000446852 ITGA2BP08514 1039 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 USP41Q3LFD5 358 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 RNF43Q68DV7 783 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 ZNF449Q6P9G9 518 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 FITM2Q8N6M3 262 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 ANKLE1Q8NAG6 615 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 MYEOVQ96EZ4 313 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 HMCESQ96FZ2 354 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 ZNF778Q96MU6 729 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 TTLL2Q9BWV7 592 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 COMMD8Q9NX08 183 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 ZNF212Q9UDV6 495 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 SOX13Q9UN79 622 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 SLC12A4Q9UP95 1085 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 CHD5Q8TDI0 1954 aa17.78■□□□□ 0.44
SMC6-206ENST00000446852 C2CD2LO14523 706 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 TPP1O14773 563 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 UBOX5O94941 541 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 BGNP21810 368 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 FAM133BQ5BKY9 247 aaKnown RBP17.77■□□□□ 0.44
SMC6-206ENST00000446852 LINC00523Q86TU6 105 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 CIR1Q86X95 450 aaPredicted RBP17.77■□□□□ 0.44
SMC6-206ENST00000446852 ARMC2Q8NEN0 867 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 IPMKQ8NFU5 416 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 DIS3LQ8TF46 1054 aaKnown RBP17.77■□□□□ 0.44
SMC6-206ENST00000446852 IGSF21Q96ID5 467 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 TOX2Q96NM4 488 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 AGAP2Q99490 1192 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 TBL1YQ9BQ87 522 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 PLCD4Q9BRC7 762 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 MECRQ9BV79 373 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 RASSF4Q9H2L5 321 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 TBX21Q9UL17 535 aa17.77■□□□□ 0.44
SMC6-206ENST00000446852 PSMD3O43242 534 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms