RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 EIF3LQ9Y262 564 aaKnown RBP16.91■□□□□ 0.3
TCOF1-206ENST00000445265 GSTT1P30711 240 aa16.91■□□□□ 0.3
TCOF1-206ENST00000445265 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
TCOF1-206ENST00000445265 RTKNQ9BST9 563 aa16.91■□□□□ 0.3
TCOF1-206ENST00000445265 THUMPD3Q9BV44 507 aaKnown RBP16.91■□□□□ 0.3
TCOF1-206ENST00000445265 CNGB3Q9NQW8 809 aa16.91■□□□□ 0.3
TCOF1-206ENST00000445265 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
TCOF1-206ENST00000445265 STYXL1Q9Y6J8 313 aa16.91■□□□□ 0.3
TCOF1-206ENST00000445265 TMEM247A6NEH6 219 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 C2P06681 752 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 LTA4HP09960 611 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 RAB10P61026 200 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 KLF1Q13351 362 aaPredicted RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 C9orf57Q5W0N0 161 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 TERB1Q8NA31 727 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 GLIS1Q8NBF1 620 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 DCAKDQ8WVC6 231 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PPP1R10Q96QC0 940 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PRPF18Q99633 342 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 MYRFQ9Y2G1 1151 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 RAMP2O60895 175 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ESRRBO95718 433 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 IL1R2P27930 398 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 GPD2P43304 727 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 USP4Q13107 963 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ZNF177Q13360 481 aaPredicted RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PCDH19Q8TAB3 1148 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 MPP4Q96JB8 637 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 MRPL57Q9BQC6 102 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 EIF2AQ9BY44 585 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 CYLDQ9NQC7 956 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 DNAJC28Q9NX36 388 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ZNF541Q9H0D2 1346 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 HNRNPRO43390 633 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PLIN3O60664 434 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 SERPINH1P50454 418 aaKnown RBP16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PLK1P53350 603 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 TBX4P57082 545 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ANKS6Q68DC2 871 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 SLC41A1Q8IVJ1 513 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 TOP6BLQ8N6T0 577 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 HASPINQ8TF76 798 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 KCTD4Q8WVF5 259 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 DCUN1D1Q96GG9 259 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 RHOJQ9H4E5 214 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 S100A14Q9HCY8 104 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 NAV1Q8NEY1 1877 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 SLC12A8A0AV02 714 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 SAC3D1A6NKF1 404 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PIK3R1P27986 724 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ADRA1BP35368 520 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 FBXW8Q8N3Y1 598 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 FAM136AQ96C01 138 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 CDCA5Q96FF9 252 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 COG4Q9H9E3 785 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ZFYVE28Q9HCC9 887 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 MID1IP1Q9NPA3 183 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 ABCC13Q9NSE7 274 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 SEPT3Q9UH03 358 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 CDH9Q9ULB4 789 aa16.9■□□□□ 0.3
TCOF1-206ENST00000445265 PAPSS1O43252 624 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 DEAF1O75398 565 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 BAIAP3O94812 1187 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 BDNFP23560 247 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 EPHA3P29320 983 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 EPHX2P34913 555 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 CLCN5P51795 746 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 KLF10Q13118 480 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 GALNTL6Q49A17 601 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 LPCAT2Q7L5N7 544 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 LRRC49Q8IUZ0 686 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 MIER2Q8N344 545 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 FBXO39Q8N4B4 442 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 PPTC7Q8NI37 304 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 KCTD15Q96SI1 283 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 GAD1Q99259 594 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 PTCH2Q9Y6C5 1203 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 EVPLLA8MZ36 301 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 VPS4BO75351 444 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 TTLL9Q3SXZ7 439 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 GJC2Q5T442 439 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 CACHD1Q5VU97 1274 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 CYP2R1Q6VVX0 501 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 TFAP2DQ7Z6R9 452 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 PCDH20Q8N6Y1 951 aaKnown RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 APOL5Q9BWW9 433 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 STRA6Q9BX79 667 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 TRIM38O00635 465 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 SIN3BO75182 1162 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 NNMTP40261 264 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 RPL5P46777 297 aaKnown RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 OXCT1P55809 520 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 PSME3P61289 254 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 POTEHQ6S545 545 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 ZSCAN18Q8TBC5 510 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 TAS2R13Q9NYV9 303 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms