RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 CXCR3P49682 368 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 ACADVLP49748 655 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 CDH4P55283 916 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 CLDN6P56747 220 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 SNX16P57768 344 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 CENPCQ03188 943 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 PTK2Q05397 1052 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 TARDBPQ13148 414 aaKnown RBP eCLIP10.43□□□□□ -0.74
HDLBP-219ENST00000442714 ILKQ13418 452 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 BECN1Q14457 450 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 STAT4Q14765 748 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 SLC45A4Q5BKX6 768 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 AGBL4Q5VU57 503 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 OR6B2Q6IFH4 312 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 FBXL19Q6PCT2 694 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 SLC26A9Q7LBE3 791 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 DSG4Q86SJ6 1040 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 ZNF683Q8IZ20 524 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 SH2D3CQ8N5H7 860 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 TMIEQ8NEW7 156 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 OR8D1Q8WZ84 308 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 C1orf74Q96LT6 269 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 RPRD1AQ96P16 312 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-219ENST00000442714 BBC3Q96PG8 261 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-219ENST00000442714 WDCPQ9H6R7 721 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 FAM204AQ9H8W3 233 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 SIX2Q9NPC8 291 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 ANLNQ9NQW6 1124 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 ARHGEF38Q9NXL2 777 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 APEX2Q9UBZ4 518 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 VANGL2Q9ULK5 521 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 HS3ST2Q9Y278 367 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 HELZ2Q9BYK8 2649 aaKnown RBP10.43□□□□□ -0.74
HDLBP-219ENST00000442714 LOC400499M0QZD8 3231 aa10.43□□□□□ -0.74
HDLBP-219ENST00000442714 PRAMEF26H0Y7S4 382 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 M0QYT0 321 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 TRIM38O00635 465 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 RNGTTO60942 597 aaKnown RBP10.42□□□□□ -0.74
HDLBP-219ENST00000442714 RFPL3O75679 317 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 CNTN5O94779 1100 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 ADCY5O95622 1261 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 ERBB2P04626 1255 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 CTSLP07711 333 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 ZNF18P17022 549 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 MAT2AP31153 395 aaKnown RBP10.42□□□□□ -0.74
HDLBP-219ENST00000442714 KRT9P35527 623 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 NME3Q13232 169 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 ZNF211Q13398 564 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-219ENST00000442714 RTP5Q14D33 572 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 EXOC3L4Q17RC7 722 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 ALFQ53S48 1182 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 OTUD1Q5VV17 481 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-219ENST00000442714 NEK5Q6P3R8 708 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 FAM183BPQ6ZVS7 135 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 SLC47A2Q86VL8 602 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 CREBRFQ8IUR6 639 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PASD1Q8IV76 773 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 FAM71AQ8IYT1 594 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 OXR1Q8N573 874 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 OR2A12Q8NGT7 310 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PIP4K2CQ8TBX8 421 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 RFFLQ8WZ73 363 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PGAP3Q96FM1 320 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PSMB7Q99436 277 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 NPY6RQ99463 290 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 NRSN2Q9GZP1 204 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 SIK2Q9H0K1 926 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PREBQ9HCU5 417 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 PIGVQ9NUD9 493 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 RRN3Q9NYV6 651 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 VPS28Q9UK41 221 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 DNAJC12Q9UKB3 198 aa10.42□□□□□ -0.74
HDLBP-219ENST00000442714 K7ERQ8 282 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 RNF103O00237 685 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 SMAD6O43541 496 aaKnown RBP10.41□□□□□ -0.74
HDLBP-219ENST00000442714 SNAP91O60641 907 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 MAGEC1O60732 1142 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 ZNF821O75541 412 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-219ENST00000442714 F9P00740 461 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 SRCP12931 536 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 TFE3P19532 575 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-219ENST00000442714 ACP1P24666 158 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 CHRNA3P32297 505 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 EIF2S3P41091 472 aaKnown RBP10.41□□□□□ -0.74
HDLBP-219ENST00000442714 GABRB2P47870 512 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 KRT83P78385 493 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 POM121L1PQ3SYA9 428 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 PTPN20Q4JDL3 420 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 PIP5KL1Q5T9C9 394 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 Q6ZVU0 165 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 SETD3Q86TU7 594 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-219ENST00000442714 ZDHHC17Q8IUH5 632 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 TMEM145Q8NBT3 493 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 C1orf131Q8NDD1 294 aaKnown RBP10.41□□□□□ -0.74
HDLBP-219ENST00000442714 KLHDC7BQ96G42 594 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 NOX5Q96PH1 765 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 TKTL2Q9H0I9 626 aa10.41□□□□□ -0.74
HDLBP-219ENST00000442714 KLHL11Q9NVR0 708 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms