RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 CBFA2T3O75081 653 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 SIN3BO75182 1162 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 MOCS3O95396 460 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 APOEP02649 317 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ASLP04424 464 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 FYNP06241 537 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ZNF883P0CG24 379 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CHRNB2P17787 502 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CD27P26842 260 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CYLC1P35663 651 aaPredicted RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ACADSBP45954 432 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CDR2Q01850 454 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 SCAPQ12770 1279 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 SFSWAPQ12872 951 aaKnown RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 DCAF6Q58WW2 860 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ZC3H12AQ5D1E8 599 aaKnown RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 MS4A13Q5J8X5 152 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 RNF219Q5W0B1 726 aaPredicted RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 LAYNQ6UX15 382 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 MMS22LQ6ZRQ5 1243 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 TAC4Q86UU9 113 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CHSY1Q86X52 802 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CCDC170Q8IYT3 715 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 LGI2Q8N0V4 545 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 EPS8L1Q8TE68 723 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 TTC17Q96AE7 1141 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 BIRC7Q96CA5 298 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 MYEOVQ96EZ4 313 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 PRICKLE1Q96MT3 831 aaPredicted RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 CDC6Q99741 560 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 RSPH9Q9H1X1 276 aaPredicted RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 PABPC3Q9H361 631 aaKnown RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 SEPT11Q9NVA2 429 aaKnown RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 FBXL12Q9NXK8 326 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 TJP2Q9UDY2 1190 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ADAMTS1Q9UHI8 967 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 PYCARDQ9ULZ3 195 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 TLR6Q9Y2C9 796 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ANKRD6Q9Y2G4 727 aa9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 EPN1Q9Y6I3 576 aaPredicted RBP9.49□□□□□ -0.89
AC011228.1-201ENST00000439027 ITPR1Q14643 2758 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 ASPMQ8IZT6 3477 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 SYNJ2BP-COX16A0A087WUM0 186 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 A0A087X0T9 212 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 FAM221BA6H8Z2 402 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 TTC34A8MYJ7 566 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 MID1O15344 667 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 FLRT2O43155 660 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 MED7O43513 233 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 RNASEH2AO75792 299 aaKnown RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 NDUFA10O95299 355 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 MMEP08473 750 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 ATXN1LP0C7T5 689 aaKnown RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 FAM228BP0C875 321 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 TACR2P21452 398 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 GPD2P43304 727 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 PSMD8P48556 350 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 NUMBP49757 651 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 C21orf59P57076 290 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 ASTE1Q2TB18 679 aaPredicted RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 HNRNPA1L2Q32P51 320 aaKnown RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 FSCBQ5H9T9 825 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 PITRM1Q5JRX3 1037 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 SYPL2Q5VXT5 272 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 RAP1GAP2Q684P5 730 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 KIAA0895LQ68EN5 471 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 CCNI2Q6ZMN8 369 aaPredicted RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 MMAAQ8IVH4 418 aaKnown RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 ZNF606Q8WXB4 792 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 RNF34Q969K3 372 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 LMLNQ96KR4 655 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 OMDQ99983 421 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 DESI2Q9BSY9 194 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 SYT11Q9BT88 431 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 TRIM62Q9BVG3 475 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 PDCL3Q9H2J4 239 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 FAM204AQ9H8W3 233 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 COX16Q9P0S2 106 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 KIAA1522Q9P206 1035 aaPredicted RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 SLC12A6Q9UHW9 1150 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 XPO7Q9UIA9 1087 aaKnown RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 SLCO3A1Q9UIG8 710 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 INTS6Q9UL03 887 aaKnown RBP9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 ERVW-1Q9UQF0 538 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 PCDHGB2Q9Y5G2 931 aa9.48□□□□□ -0.89
AC011228.1-201ENST00000439027 EDDM13A0A1B0GTR0 161 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 A0A1W2PP55 124 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 FAM170AA1A519 330 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 LRRC72A6NJI9 287 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 EIF3CLB5ME19 914 aaKnown RBP9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 E5RJQ4 531 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 F5H5T6 163 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 H0Y8X5 98 aa9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 PAPSS1O43252 624 aaPredicted RBP9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 LUC7L3O95232 432 aaKnown RBP9.47□□□□□ -0.89
AC011228.1-201ENST00000439027 IPO7O95373 1038 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms