RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KYAT3Q6YP21 454 aaKnown RBP11.49□□□□□ -0.57
RTN4-211ENST00000438462 BNC2Q6ZN30 1099 aaPredicted RBP11.49□□□□□ -0.57
RTN4-211ENST00000438462 APLFQ8IW19 511 aaPredicted RBP11.49□□□□□ -0.57
RTN4-211ENST00000438462 PCDH19Q8TAB3 1148 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 NUDT8Q8WV74 236 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 PNPLA2Q96AD5 504 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 SMR3AQ99954 134 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 B3GNT5Q9BYG0 378 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 DPEP3Q9H4B8 488 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 OSGIN2Q9Y236 505 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 POLEQ07864 2286 aa11.49□□□□□ -0.57
RTN4-211ENST00000438462 CDC14CA4D256 554 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 VWA3AA6NCI4 1184 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 POM121BA6NF01 834 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 DEXIO95424 95 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 CELA2BP08218 269 aaPredicted RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 PLS3P13797 630 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 FOSL1P15407 271 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 WNT7BP56706 349 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 TLE4Q04727 773 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 CNTN1Q12860 1018 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 EIF2B5Q13144 721 aaKnown RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 SEMA5AQ13591 1074 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 PDE1CQ14123 709 aaPredicted RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 NECTIN1Q15223 517 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 ZNF630Q2M218 657 aaPredicted RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 MPPE1Q53F39 396 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 KLHDC10Q6PID8 442 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 LIMS2Q7Z4I7 341 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 FJX1Q86VR8 437 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 SYT2Q8N9I0 419 aaPredicted RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 CCDC112Q8NEF3 446 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 CXorf38Q8TB03 319 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 BTN2A2Q8WVV5 523 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 C14orf79Q96F83 325 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 BMFQ96LC9 184 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 DCLK3Q9C098 648 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 CLPBQ9H078 707 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 LSG1Q9H089 658 aaKnown RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
RTN4-211ENST00000438462 IPO11Q9UI26 975 aaKnown RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 PRRC2AP48634 2157 aaKnown RBP11.48□□□□□ -0.57
RTN4-211ENST00000438462 HGSO14964 777 aaPredicted RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 SPINT1O43278 529 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 DPM1O60762 260 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 PIGRP01833 764 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 F8A1P23610 371 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 TAS2R38P59533 333 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 CCT2P78371 535 aaKnown RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 ELAVL3Q14576 367 aaKnown RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 ANKS6Q68DC2 871 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 PARS2Q7L3T8 475 aaKnown RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 DPH6Q7L8W6 267 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 SPRED1Q7Z699 444 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 BIVMQ86UB2 503 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 FAM35AQ86V20 835 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 CHD1LQ86WJ1 897 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 NT5DC4Q86YG4 428 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 FAM217AQ8IXS0 508 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 IQCKQ8N0W5 287 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 CSGALNACT2Q8N6G5 542 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 ITLN2Q8WWU7 325 aaPredicted RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 BRF1Q92994 677 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 ARSGQ96EG1 525 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 CGRRF1Q99675 332 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 ASPSCR1Q9BZE9 553 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 TMEM60Q9H2L4 133 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 RDH14Q9HBH5 336 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 MCCC2Q9HCC0 563 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 MLXIPLQ9NP71 852 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 DMAP1Q9NPF5 467 aaPredicted RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
RTN4-211ENST00000438462 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 SLC39A1Q9NY26 324 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 RASAL2Q9UJF2 1139 aa11.47□□□□□ -0.57
RTN4-211ENST00000438462 PCDHGA9Q9Y5G4 932 aaKnown RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 MAP1AP78559 2803 aaPredicted RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 FLNAP21333 2647 aaKnown RBP11.47□□□□□ -0.57
RTN4-211ENST00000438462 VPS13CQ709C8 3753 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 ITIH6Q6UXX5 1313 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 SIX3O95343 332 aaPredicted RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 PLA2G4BP0C869 781 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 TSHRP16473 764 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 CSKP41240 450 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 ADCK5Q3MIX3 580 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 DCAF12Q5T6F0 453 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 PAPD7Q5XG87 772 aaKnown RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 CPZQ66K79 652 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 HAUS3Q68CZ6 603 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 HORMAD1Q86X24 394 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 PHACTR4Q8IZ21 702 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 NRSN1Q8IZ57 195 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 FAM177A1Q8N128 213 aaPredicted RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 RBMXL3Q8N7X1 1067 aaKnown RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 ST6GALNAC3Q8NDV1 305 aa11.46□□□□□ -0.57
RTN4-211ENST00000438462 MRPL45Q9BRJ2 306 aaKnown RBP11.46□□□□□ -0.57
RTN4-211ENST00000438462 CXXC4Q9H2H0 198 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms