RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MARC1Q5VT66 337 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PRMT9Q6P2P2 845 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC26A9Q7LBE3 791 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC41A1Q8IVJ1 513 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DCP1BQ8IZD4 617 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ENDOVQ8N8Q3 282 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 C2orf69Q8N8R5 385 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 B3GALNT2Q8NCR0 500 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DDHD1Q8NEL9 900 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 WDR60Q8WVS4 1066 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DGCR14Q96DF8 476 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RPRD1AQ96P16 312 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 EBF4Q9BQW3 602 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC4A5Q9BY07 1137 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 UGT1A7Q9HAW7 530 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 UGT1A10Q9HAW8 530 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 UGT1A8Q9HAW9 530 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SYTL2Q9HCH5 934 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 XPR1Q9UBH6 696 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ZMYND8Q9ULU4 1186 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 STYXL1Q9Y6J8 313 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 COL18A1P39060 1754 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 A0A087WXM4 84 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 A0A087X1B8 175 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 C17orf102A2RUQ5 167 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SPDYE5A6NIY4 337 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CXorf49A8MYA2 514 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 INPP4BO15327 924 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CLOCKO15516 846 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 BAIAP3O94812 1187 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 METTL18O95568 372 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ESRRBO95718 433 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GLP2RO95838 553 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 OAS1P00973 400 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 VAV1P15498 845 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 XPAP23025 273 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 LRPAP1P30533 357 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RENBPP51606 427 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CHRNB3Q05901 458 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RAD51Q06609 339 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CDC16Q13042 620 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DCTN2Q13561 401 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GPR162Q16538 588 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC5A9Q2M3M2 681 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC44A4Q53GD3 710 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 LBX2Q6XYB7 198 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RBM44Q6ZP01 1051 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ASRGL1Q7L266 308 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ATP6V0D2Q8N8Y2 350 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DNAJB3Q8WWF6 145 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SLC7A6OSQ96CW6 309 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 OMDQ99983 421 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MAF1Q9H063 256 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 TMEM216Q9P0N5 145 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 KIF17Q9P2E2 1029 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DNAJB4Q9UDY4 337 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 VPS9D1Q9Y2B5 631 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 NDUFAF1Q9Y375 327 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PTPRJQ12913 1337 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MYH1P12882 1939 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DOT1LQ8TEK3 1739 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PEX1O43933 1283 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MFSD11O43934 449 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GRIN3BO60391 1043 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CSPG5O95196 566 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MPSTP25325 297 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MSX2P35548 267 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ADCYAP1R1P41586 468 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CPT1AP50416 773 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MRPS5P82675 430 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 KCNJ11Q14654 390 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RALGPS1Q5JS13 557 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 WSCD1Q658N2 575 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ANGPTL8Q6UXH0 198 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ILDR2Q71H61 639 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CLVS1Q8IUQ0 354 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GALNT15Q8N3T1 639 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 TSPAN14Q8NG11 270 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SMARCD1Q96GM5 515 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 LENG8Q96PV6 779 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PARK7Q99497 189 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 NDNQ99608 321 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GORASP1Q9BQQ3 440 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 C17orf80Q9BSJ5 609 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 TRIM54Q9BYV2 358 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RHOJQ9H4E5 214 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 TRMT6Q9UJA5 497 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 NAV1Q8NEY1 1877 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 EME2A4GXA9 379 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 H0Y626 953 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CLASP2O75122 1294 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DAB1O75553 588 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 TRIM16O95361 564 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SNRPB2P08579 225 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 FGFR3P22607 806 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 PEX2P28328 305 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms