RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 VANGL2Q9ULK5 521 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 CCL26Q9Y258 94 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 CLUHO75153 1309 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 GBF1Q92538 1859 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 E2F8A0AVK6 867 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 CCDC188H7C350 402 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 APOC4-APOC2K7ER74 178 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 APOL1O14791 398 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 DAPK3O43293 454 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 LIASO43766 372 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 PHF2O75151 1096 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 CNTN5O94779 1100 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 LATS1O95835 1130 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 APOC2P02655 101 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ZFXP17010 805 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 HTR7P34969 479 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 AVPR1AP37288 418 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 COILP38432 576 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 SGSHP51688 502 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 MRPS25P82663 173 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 OTUD4Q01804 1114 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 TNP2Q05952 138 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 SNX1Q13596 522 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 PAFAH1B3Q15102 231 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 CCNG2Q16589 344 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 KCTD19Q17RG1 926 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ALFQ53S48 1182 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 FAM78AQ5JUQ0 283 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ATAT1Q5SQI0 421 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ADGRF1Q5T601 910 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ACBD5Q5T8D3 534 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 RWDD4Q6NW29 188 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 RFWD3Q6PCD5 774 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 Q7L0L9 218 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 NLRP14Q86W24 1093 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 CCNJLQ8IV13 435 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ARID3BQ8IVW6 561 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 NPAS3Q8IXF0 933 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 TP53INP2Q8IXH6 220 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 FAM217AQ8IXS0 508 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 LGI2Q8N0V4 545 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 NPWQ8N729 165 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 NETO2Q8NC67 525 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC35B2Q8TB61 432 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ZSCAN18Q8TBC5 510 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ACTL9Q8TC94 416 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 SH3RF2Q8TEC5 729 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 MAIP1Q8WWC4 291 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 FGF13Q92913 245 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 NKD2Q969F2 451 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 MAGOHBQ96A72 148 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 HAUS1Q96CS2 278 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 TBC1D31Q96DN5 1066 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 PABPC5Q96DU9 382 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 RSPRY1Q96DX4 576 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 P2RY11Q96G91 374 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 RPGRIP1Q96KN7 1286 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 PRICKLE1Q96MT3 831 aaPredicted RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 TMEM74Q96NL1 305 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 LRRC3BQ96PB8 259 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 KRT12Q99456 494 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 LRRC1Q9BTT6 524 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ZYG11BQ9C0D3 744 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 CEP44Q9C0F1 390 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 DDX47Q9H0S4 455 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 PRDM16Q9HAZ2 1276 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 TDP1Q9NUW8 608 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 MPP6Q9NZW5 540 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 PPARGC1AQ9UBK2 798 aaKnown RBP7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF212Q9UDV6 495 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 ZMYM5Q9UJ78 669 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 DNPEPQ9ULA0 475 aa7.23□□□□□ -1.25
LSM3P3-201ENST00000436601 CHD9Q3L8U1 2897 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 GOLGA6L10A0A0M3HER8 536 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 EFCAB8A8MWE9 144 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 WASH4PA8MWX3 477 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 F5H5T6 163 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TRDMT1O14717 391 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 KHNYNO15037 678 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 FGF10O15520 208 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 MFSD11O43934 449 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 MAN1A2O60476 641 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TSPAN3O60637 253 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TGM2P21980 687 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CHRNA3P32297 505 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 VIPR2P41587 438 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 KCNJ1P48048 391 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 RPS24P62847 133 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 PLAURQ03405 335 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 NOMO1Q15155 1222 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 OASLQ15646 514 aaKnown RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF77Q15935 545 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 AFMIDQ63HM1 303 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 CES5AQ6NT32 575 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 DRICH1Q6PGQ1 229 aaPredicted RBP7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 TMCO3Q6UWJ1 677 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 LRRC31Q6UY01 552 aa7.22□□□□□ -1.25
LSM3P3-201ENST00000436601 EP400NLQ6ZTU2 488 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms