RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■□□ 18.4
CTDSPL-204ENST00000435525 ACVRL1P37023 503 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 RPS9P46781 194 aaKnown RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 CLCN5P51795 746 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 CLCN6P51797 869 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 STARD3Q14849 445 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 EOGTQ5NDL2 527 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 AFMIDQ63HM1 303 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 SERPINA13PQ6UXR4 307 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 ATP11CQ8NB49 1132 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 CCNYQ8ND76 341 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 PBXIP1Q96AQ6 731 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 ALG14Q96F25 216 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 PSMB7Q99436 277 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 FRMD8P1Q9BZ68 369 aaPredicted RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 FOXQ1Q9C009 403 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 THAP10Q9P2Z0 257 aaPredicted RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 UBA2Q9UBT2 640 aaPredicted RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 SUN2Q9UH99 717 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 IPO11Q9UI26 975 aaKnown RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 VPS51Q9UID3 782 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 INTS6Q9UL03 887 aaKnown RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 SNX12Q9UMY4 172 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 ERVW-1Q9UQF0 538 aa16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 FARP1Q9Y4F1 1045 aaPredicted RBP16.9■□□□□ 0.3
CTDSPL-204ENST00000435525 PRUNE2Q8WUY3 3088 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 CES2O00748 559 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 MFSD11O43934 449 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 RNF40O75150 1001 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 ATP1A1P05023 1023 aaKnown RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 NTSR1P30989 418 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 TIE1P35590 1138 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 RECQLP46063 649 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 VASPP50552 380 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 IL10RBQ08334 325 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 GALNT2Q10471 571 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 RFTN1Q14699 578 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 LLGL1Q15334 1064 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 ACCSLQ4AC99 568 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 C2orf27AQ580R0 203 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 NPWQ8N729 165 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 USP33Q8TEY7 942 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 ZNF599Q96NL3 588 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 COL25A1Q9BXS0 654 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 NOL6Q9H6R4 1146 aaKnown RBP16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 DTLQ9NZJ0 730 aa16.89■□□□□ 0.29
CTDSPL-204ENST00000435525 TICRRQ7Z2Z1 1910 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 HACD1B0YJ81 288 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 MCF2LO15068 1137 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 MTSS1O43312 755 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 PRAMEF11O60813 436 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 KLF8O95600 359 aaPredicted RBP16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 PRLRP16471 622 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 GARSP41250 739 aaKnown RBP16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 GBE1Q04446 702 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 ZNF33AQ06730 810 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 MESP2Q0VG99 397 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 ZNF234Q14588 700 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 LONRF2Q1L5Z9 754 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 INO80DQ53TQ3 878 aaPredicted RBP16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 BMP8AQ7Z5Y6 402 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 SLC13A5Q86YT5 568 aaPredicted RBP16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 ARHGAP12Q8IWW6 846 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 RPLP0P6Q8NHW5 317 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 CYB5D2Q8WUJ1 264 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 CLDN23Q96B33 292 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 C16orf45Q96MC5 204 aaPredicted RBP16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 WDR24Q96S15 920 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 OSBPL9Q96SU4 736 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 HOMER3Q9NSC5 361 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 HS3ST2Q9Y278 367 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 SAR1BQ9Y6B6 198 aa16.88■□□□□ 0.29
CTDSPL-204ENST00000435525 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 MYO10Q9HD67 2058 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 SHISA7A6NL88 538 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CHURC1-FNTBB4DL54 471 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 H7C0C1 242 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 SNAP91O60641 907 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 STK10O94804 968 aaKnown RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 FGGP02679 453 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 AOC1P19801 751 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CCNCP24863 283 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CXCR5P32302 372 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 KIR2DL1P43626 348 aaPredicted RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 ATP5OP48047 213 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 SERPINH1P50454 418 aaKnown RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 RENBPP51606 427 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 XRCC4Q13426 336 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 DCAF12L1Q5VU92 463 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 TMEM215Q68D42 235 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 SYT10Q6XYQ8 523 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CDKL3Q8IVW4 592 aaPredicted RBP16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 CCDC105Q8IYK2 499 aa16.87■□□□□ 0.29
CTDSPL-204ENST00000435525 TFB1MQ8WVM0 346 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms