RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 BUD23O43709 281 aaKnown RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 MPOP05164 745 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 CHRNGP07510 517 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 ZCCHC18P0CG32 403 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 NMBRP28336 390 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 PSEN1P49768 467 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 MFSD10Q14728 455 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 CCL15Q16663 113 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 AAGABQ6PD74 315 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 CLEC14AQ86T13 490 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 NTAN1Q96AB6 310 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 PCED1BQ96HM7 432 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 CELF6Q96J87 481 aaKnown RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 VPS39Q96JC1 886 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 MS4A4AQ96JQ5 239 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 COLEC11Q9BWP8 271 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 GATA5Q9BWX5 397 aaPredicted RBP12.04□□□□□ -0.48
CD44-209ENST00000433892 PIDD1Q9HB75 910 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 SLC39A10Q9ULF5 831 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 ASB3Q9Y575 518 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 BRCA2P51587 3418 aa12.04□□□□□ -0.48
CD44-209ENST00000433892 GOLGA8QA0A0J9YX86 632 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 GOLGA8OA6NCC3 632 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 GOLGA8NF8WBI6 632 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TK2O00142 265 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 NCAM2O15394 837 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TIMM44O43615 452 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TRIM13O60858 407 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 JCHAINP01591 159 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 COX4I1P13073 169 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
CD44-209ENST00000433892 EPHX2P34913 555 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 CCR10P46092 362 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 AFF1P51825 1210 aaKnown RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 BTKQ06187 659 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 SCAPQ12770 1279 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 FSCBQ5H9T9 825 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 LPCAT4Q643R3 524 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 ZMIZ2Q8NF64 920 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 SENP8Q96LD8 212 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 APBA2Q99767 749 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TASP1Q9H6P5 420 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 WDCPQ9H6R7 721 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 WDR55Q9H6Y2 383 aaPredicted RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 OR12D3Q9UGF7 316 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 ADAMTS6Q9UKP5 1117 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 POMPQ9Y244 141 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TSC2P49815 1807 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TRIP12Q14669 1992 aaPredicted RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 NEMP1O14524 444 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 FBXO21O94952 628 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 LYNP07948 512 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 MPSTP25325 297 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 LRPAP1P30533 357 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 SERPINB5P36952 375 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 AIF1P55008 147 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 ADAM17P78536 824 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 KLF10Q13118 480 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 GRM3Q14832 879 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 GSTA3Q16772 222 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 USP50Q70EL3 339 aaPredicted RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 FAM35AQ86V20 835 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 ZNF483Q8TF39 744 aaPredicted RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 BRI3BPQ8WY22 251 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 HDAC11Q96DB2 347 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 IFT43Q96FT9 208 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 LENG8Q96PV6 779 aaPredicted RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 PPP1R10Q96QC0 940 aaKnown RBP12.03□□□□□ -0.48
CD44-209ENST00000433892 RHOBTB2Q9BYZ6 727 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 IL22Q9GZX6 179 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TKTL2Q9H0I9 626 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TCF7L2Q9NQB0 619 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 ARHGAP26Q9UNA1 814 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 RAD54BQ9Y620 910 aa12.03□□□□□ -0.48
CD44-209ENST00000433892 SHROOM3Q8TF72 1996 aa12.02□□□□□ -0.48
CD44-209ENST00000433892 MAGEB16A2A368 324 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 ERI2A8K979 691 aaKnown RBP12.02□□□□□ -0.49
CD44-209ENST00000433892 TMEM114B3SHH9 223 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 PHGDHO43175 533 aaKnown RBP12.02□□□□□ -0.49
CD44-209ENST00000433892 LRIG2O94898 1065 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 SERPINB6P35237 376 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 AVPR1AP37288 418 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 GLRBP48167 497 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 HCAR3P49019 387 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 NPY2RP49146 381 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 GALNT2Q10471 571 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 ARL13BQ3SXY8 428 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 THEMIS2Q5TEJ8 643 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 FOXB2Q5VYV0 432 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 ITPRIPL1Q6GPH6 555 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 OTOP3Q7RTS5 596 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 ADGRG6Q86SQ4 1221 aa12.02□□□□□ -0.49
CD44-209ENST00000433892 APLFQ8IW19 511 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms