RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ZNF208O43345 1280 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 MAPK9P45984 424 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 PIK3CGP48736 1102 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 TCEA2Q15560 299 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 HMBOX1Q6NT76 420 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 ACOT12Q8WYK0 555 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 REM1O75628 298 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 LARGE1O95461 756 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 DNTTP04053 509 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 TCF7P36402 384 aaPredicted RBP16.7■□□□□ 0.26
RIF1-204ENST00000430328 GRIA3P42263 894 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 OGFRL1Q5TC84 451 aaPredicted RBP16.7■□□□□ 0.26
RIF1-204ENST00000430328 SYN2Q92777 582 aaPredicted RBP16.7■□□□□ 0.26
RIF1-204ENST00000430328 CDC42EP4Q9H3Q1 356 aaKnown RBP16.7■□□□□ 0.26
RIF1-204ENST00000430328 CCNB1IP1Q9NPC3 277 aa16.7■□□□□ 0.26
RIF1-204ENST00000430328 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 LACTB2Q53H82 288 aaPredicted RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 FRMD7Q6ZUT3 714 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 SLC4A11Q8NBS3 891 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 PNPLA3Q9NST1 481 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 TAS2R13Q9NYV9 303 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 DUOX2Q9NRD8 1548 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 GARTP22102 1010 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 PDX1P52945 283 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 RPP38P78345 283 aaKnown RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 NET1Q7Z628 596 aaPredicted RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 NAT14Q8WUY8 206 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 DBIP07108 87 aaKnown RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 ODC1P11926 461 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 ENPEPQ07075 957 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 RHEBQ15382 184 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 SYT12Q8IV01 421 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 GATAD2BQ8WXI9 593 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 TMEM260Q9NX78 707 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 NPHP3-ACAD11A0A0J9YXS1 232 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 PDIA5Q14554 519 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 GPAT3Q53EU6 434 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 ARMC10Q8N2F6 343 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 SRFBP1Q8NEF9 429 aaKnown RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 NOL4O94818 638 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 NFKB1P19838 968 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 EPHA7Q15375 998 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 POU5F2Q8N7G0 328 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 INTS7Q9NVH2 962 aaKnown RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 NKIRAS2Q9NYR9 191 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 BPNT1O95861 308 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 COX7A2P14406 83 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 PNPLA4P41247 253 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 ELOA2Q8IYF1 753 aaPredicted RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 ATL1Q8WXF7 558 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 POP5Q969H6 163 aaKnown RBP16.69■□□□□ 0.26
RIF1-204ENST00000430328 GJB4Q9NTQ9 266 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 MEMO1Q9Y316 297 aa16.69■□□□□ 0.26
RIF1-204ENST00000430328 PPEF2O14830 753 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 PSMG1O95456 288 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 IFNGP01579 166 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 ACAP2Q15057 778 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 CDKL4Q5MAI5 379 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 WDR93Q6P2C0 686 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 CUL7Q14999 1698 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 FDX1P10109 184 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 CD151P48509 253 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 PAGE2BQ5JRK9 111 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 BRSK2Q8IWQ3 736 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 HGH1Q9BTY7 390 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 LMTK3Q96Q04 1460 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 IL27RAQ6UWB1 636 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 PLEKHF1Q96S99 279 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
RIF1-204ENST00000430328 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 NCAM2O15394 837 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 MAGEB2O15479 319 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 SIN3BO75182 1162 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 PRKCEQ02156 737 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 N4BP2L1Q5TBK1 243 aaPredicted RBP16.68■□□□□ 0.26
RIF1-204ENST00000430328 ZNF549Q6P9A3 640 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 ATXN2LQ8WWM7 1075 aaKnown RBP16.68■□□□□ 0.26
RIF1-204ENST00000430328 ANTXR1Q9H6X2 564 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 KIAA1257Q9ULG3 409 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 TLX1P31314 330 aaPredicted RBP16.68■□□□□ 0.26
RIF1-204ENST00000430328 FAM76BQ5HYJ3 339 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 PTCHD4Q6ZW05 846 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 FBXW8Q8N3Y1 598 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 TMEM47Q9BQJ4 181 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 RNPEPL1Q9HAU8 725 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 SAMD4AQ9UPU9 718 aaKnown RBP16.68■□□□□ 0.26
RIF1-204ENST00000430328 MAFKO60675 156 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 UPP2O95045 317 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
RIF1-204ENST00000430328 MGAT5Q09328 741 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms