RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 INPP4BO15327 924 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 PIGRP01833 764 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 MATKP42679 507 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 B3GNT9Q6UX72 402 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 GALNT15Q8N3T1 639 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 MROH8Q9H579 483 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 OR12D3Q9UGF7 316 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 MYRFQ9Y2G1 1151 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 TMCC1O94876 653 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 C16orf72Q14CZ0 275 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 TFAP2DQ7Z6R9 452 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 RP9Q8TA86 221 aaKnown RBP12.85□□□□□ -0.35
CPNE4-201ENST00000429747 CLEC4CQ8WTT0 213 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 SEPHS2Q99611 448 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 NDFIP2Q9NV92 336 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 C6orf203Q9P0P8 240 aaPredicted RBP12.85□□□□□ -0.35
CPNE4-201ENST00000429747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.85□□□□□ -0.35
CPNE4-201ENST00000429747 TUBGCP4Q9UGJ1 667 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 ADAM28Q9UKQ2 775 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
CPNE4-201ENST00000429747 CASTOR2A6NHX0 329 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 IRF6O14896 467 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 FBXO21O94952 628 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 MAPK10P53779 464 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 NFYCQ13952 458 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 C15orf39Q6ZRI6 1047 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 SKA1Q96BD8 255 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 GATA5Q9BWX5 397 aaPredicted RBP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 CHRAC1Q9NRG0 131 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 DTLQ9NZJ0 730 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 LTFP02788 710 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 ZNF252P-AS1Q0IIN9 211 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 SNAPC2Q13487 334 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 OTUD3Q5T2D3 398 aaPredicted RBP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 TMTC4Q5T4D3 741 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 LIPMQ5VYY2 423 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 NEPROQ6NW34 567 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 MIB1Q86YT6 1006 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 DSELQ8IZU8 1212 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 WDTC1Q8N5D0 677 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 ABI2Q9NYB9 513 aaPredicted RBP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 CD274Q9NZQ7 290 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 PLCH1Q4KWH8 1693 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 C10orf71Q711Q0 1435 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 GCATO75600 419 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 EGFRP00533 1210 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 CRABP2P29373 138 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 HMOX2P30519 316 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 LRPAP1P30533 357 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 PSEN1P49768 467 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 SLC10A6Q3KNW5 377 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 SCARA3Q6AZY7 606 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 FAM156AQ8NDB6 213 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 DLG3Q92796 817 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 QKIQ96PU8 341 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 RTKNQ9BST9 563 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 PIDD1Q9HB75 910 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 GOLGA2P5Q9HBQ8 144 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 TK2O00142 265 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 MDM4O15151 490 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 PTPN1P18031 435 aaKnown RBP12.84□□□□□ -0.35
CPNE4-201ENST00000429747 CCR1P32246 355 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 GRIA3P42263 894 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 ABL2P42684 1182 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 TSPAN14Q8NG11 270 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 ARHGEF4Q9NR80 690 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
CPNE4-201ENST00000429747 NPR3P17342 541 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 PRKAA2P54646 552 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 SGO1Q5FBB7 561 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 SATL1Q86VE3 508 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 DGCR14Q96DF8 476 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 AGAP2Q99490 1192 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 UTP6Q9NYH9 597 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 AFF4Q9UHB7 1163 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 CRYL1Q9Y2S2 319 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 TMEM114B3SHH9 223 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 CLOCKO15516 846 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 MLNP12872 115 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 TFEBP19484 476 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 FASP25445 335 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 ADARP55265 1226 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 AASDHQ4L235 1098 aaPredicted RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 SAMD4BQ5PRF9 694 aaKnown RBP12.83□□□□□ -0.36
CPNE4-201ENST00000429747 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 FSTL4Q6MZW2 842 aa12.83□□□□□ -0.36
CPNE4-201ENST00000429747 ANGPTL8Q6UXH0 198 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms