RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 ARHGAP18Q8N392 663 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
HIPK2-203ENST00000428878 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 OR51F1A6NGY5 319 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 GABRDO14764 452 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 INPPL1O15357 1258 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 CNPP09543 421 aaKnown RBP11.23□□□□□ -0.61
HIPK2-203ENST00000428878 ADRA1DP25100 572 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 CST5P28325 142 aaPredicted RBP11.23□□□□□ -0.61
HIPK2-203ENST00000428878 MMP13P45452 471 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 ZBTB17Q13105 803 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 FYB2Q5VWT5 728 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 ZNF470Q6ECI4 717 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
HIPK2-203ENST00000428878 RHBDF2Q6PJF5 856 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 SCD5Q86SK9 330 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 STK32AQ8WU08 396 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 MYOCQ99972 504 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 ZCWPW1Q9H0M4 648 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 VIPAS39Q9H9C1 493 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 ZDHHC18Q9NUE0 388 aa11.23□□□□□ -0.61
HIPK2-203ENST00000428878 TSPAN8P19075 237 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 GARSP41250 739 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 WDR5P61964 334 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 DSC3Q14574 896 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 NAPRTQ6XQN6 538 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 MRPL10Q7Z7H8 261 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 NUDCD3Q8IVD9 361 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 TDRD5Q8NAT2 981 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 SLC35B2Q8TB61 432 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 IGSF8Q969P0 613 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 SLC22A12Q96S37 553 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 BBS2Q9BXC9 721 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 TASP1Q9H6P5 420 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 SLCO1B3Q9NPD5 702 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 KLHL14Q9P2G3 628 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 HIDE1A8MVS5 230 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 SYN3O14994 580 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 HAPLN1P10915 354 aaPredicted RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 NCF2P19878 526 aaPredicted RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 TYMPP19971 482 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 SETDB1Q15047 1291 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 PPM1JQ5JR12 505 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 PPHLN1Q8NEY8 458 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 APBB2Q92870 758 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 FBXO6Q9NRD1 293 aaPredicted RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 PCDHB9Q9Y5E1 797 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 LAG3P18627 525 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 TACR2P21452 398 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 FOXD4Q12950 439 aaPredicted RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 GPR17Q13304 367 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 ZNF460Q14592 562 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 RABGAP1LQ5R372 815 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 RNASEH2BQ5TBB1 312 aaKnown RBP11.22□□□□□ -0.61
HIPK2-203ENST00000428878 NAPEPLDQ6IQ20 393 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 CMTM8Q8IZV2 173 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 AGAP2Q99490 1192 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 CIDEBQ9UHD4 219 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 FAM50BQ9Y247 325 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 CAPN7Q9Y6W3 813 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 SCN4AP35499 1836 aa11.22□□□□□ -0.61
HIPK2-203ENST00000428878 PPFIA2O75334 1257 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 FYNP06241 537 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 PTPN3P26045 913 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 DLG2Q15700 870 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 DPYSL2Q16555 572 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 TADA2BQ86TJ2 420 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 ZNF461Q8TAF7 563 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 MOCOSQ96EN8 888 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 OMDQ99983 421 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 EMILIN2Q9BXX0 1053 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 SCUBE2Q9NQ36 999 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 OTOFQ9HC10 1997 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 CPA2P48052 419 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 WNT3AP56704 352 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 PTPRRQ15256 657 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 OASLQ15646 514 aaKnown RBP11.21□□□□□ -0.61
HIPK2-203ENST00000428878 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.61
HIPK2-203ENST00000428878 ARMC12Q5T9G4 340 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 UNC5AQ6ZN44 842 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 YAF2Q8IY57 180 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 GSDMBQ8TAX9 411 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.61
HIPK2-203ENST00000428878 UBE2OQ9C0C9 1292 aaKnown RBP11.21□□□□□ -0.61
HIPK2-203ENST00000428878 BRD8Q9H0E9 1235 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 GTSE1Q9NYZ3 720 aa11.21□□□□□ -0.61
HIPK2-203ENST00000428878 CXorf49A8MYA2 514 aaPredicted RBP11.21□□□□□ -0.62
HIPK2-203ENST00000428878 PITPNM1O00562 1244 aa11.21□□□□□ -0.62
HIPK2-203ENST00000428878 GABRB2P47870 512 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms