RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 FAM183BPQ6ZVS7 135 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SLC25A45Q8N413 288 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 FAM131CQ96AQ9 280 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SLC2A13Q96QE2 648 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 SIK2Q9H0K1 926 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 ERVMER34-1Q9H9K5 563 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 PLCB1Q9NQ66 1216 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 ANLNQ9NQW6 1124 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 UCKL1Q9NWZ5 548 aa17.01■□□□□ 0.31
VARS-216ENST00000428445 GCN1Q92616 2671 aaKnown RBP17■□□□□ 0.31
VARS-216ENST00000428445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17■□□□□ 0.31
VARS-216ENST00000428445 BICDL2A1A5D9 508 aa17■□□□□ 0.31
VARS-216ENST00000428445 EIF4E1BA6NMX2 242 aaKnown RBP17■□□□□ 0.31
VARS-216ENST00000428445 SIGLEC6O43699 453 aa17■□□□□ 0.31
VARS-216ENST00000428445 ATP9BO43861 1147 aa17■□□□□ 0.31
VARS-216ENST00000428445 SNAP91O60641 907 aa17■□□□□ 0.31
VARS-216ENST00000428445 RNGTTO60942 597 aaKnown RBP17■□□□□ 0.31
VARS-216ENST00000428445 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
VARS-216ENST00000428445 ERBB2P04626 1255 aa17■□□□□ 0.31
VARS-216ENST00000428445 C1SP09871 688 aa17■□□□□ 0.31
VARS-216ENST00000428445 CKMT2P17540 419 aa17■□□□□ 0.31
VARS-216ENST00000428445 CCR1P32246 355 aa17■□□□□ 0.31
VARS-216ENST00000428445 HNF1BP35680 557 aa17■□□□□ 0.31
VARS-216ENST00000428445 SULT2A1Q06520 285 aa17■□□□□ 0.31
VARS-216ENST00000428445 ZNF177Q13360 481 aaPredicted RBP17■□□□□ 0.31
VARS-216ENST00000428445 BECN1Q14457 450 aa17■□□□□ 0.31
VARS-216ENST00000428445 MEA1Q16626 185 aa17■□□□□ 0.31
VARS-216ENST00000428445 RABGAP1LQ5R372 815 aa17■□□□□ 0.31
VARS-216ENST00000428445 NXPE2Q96DL1 559 aa17■□□□□ 0.31
VARS-216ENST00000428445 PPP1R13BQ96KQ4 1090 aa17■□□□□ 0.31
VARS-216ENST00000428445 TRIM62Q9BVG3 475 aa17■□□□□ 0.31
VARS-216ENST00000428445 TMPRSS4Q9NRS4 437 aa17■□□□□ 0.31
VARS-216ENST00000428445 SLC25A13Q9UJS0 675 aa17■□□□□ 0.31
VARS-216ENST00000428445 I6L893 689 aaPredicted RBP16.99■□□□□ 0.31
VARS-216ENST00000428445 MCF2LO15068 1137 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 PAGE1O75459 146 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 ADCY5O95622 1261 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 PNMA6AP0CW24 399 aaPredicted RBP16.99■□□□□ 0.31
VARS-216ENST00000428445 MARSP56192 900 aaKnown RBP16.99■□□□□ 0.31
VARS-216ENST00000428445 INSM1Q01101 510 aaPredicted RBP16.99■□□□□ 0.31
VARS-216ENST00000428445 PAK1Q13153 545 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 PROX2Q3B8N5 592 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 ALFQ53S48 1182 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 OTUD1Q5VV17 481 aaPredicted RBP16.99■□□□□ 0.31
VARS-216ENST00000428445 TRIM65Q6PJ69 517 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 SH2D3CQ8N5H7 860 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 C1orf131Q8NDD1 294 aaKnown RBP16.99■□□□□ 0.31
VARS-216ENST00000428445 ARRDC3Q96B67 414 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 KLHDC7BQ96G42 594 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 PSMB7Q99436 277 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 VPS28Q9UK41 221 aa16.99■□□□□ 0.31
VARS-216ENST00000428445 A0A1W2PQU0 124 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 E9PAM4 449 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 M0QYT0 321 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 YKT6O15498 198 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 FFAR2O15552 330 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 SMAD6O43541 496 aaKnown RBP16.98■□□□□ 0.31
VARS-216ENST00000428445 BRINP1O60477 761 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 ENDOD1O94919 500 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 SRCP12931 536 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 GLDCP23378 1020 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 RRM1P23921 792 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 CLDN2P57739 230 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 RNASE9P60153 205 aaKnown RBP16.98■□□□□ 0.31
VARS-216ENST00000428445 ZNF542PQ5EBM4 170 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 EFHC1Q5JVL4 640 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 PIP5KL1Q5T9C9 394 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 FAM46CQ5VWP2 391 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 LINGO4Q6UY18 593 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 KDM7AQ6ZMT4 941 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 TMC6Q7Z403 805 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 CHST14Q8NCH0 376 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 NOX5Q96PH1 765 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 MUC3BQ9H195 1237 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 KDM4CQ9H3R0 1056 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 PRORYQ9H606 182 aa16.98■□□□□ 0.31
VARS-216ENST00000428445 A0A0D9SEW6 157 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 C1QTNF3-AMACRE9PGA6 284 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 PRAMEF26H0Y7S4 382 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 KPNA3O00505 521 aaPredicted RBP16.97■□□□□ 0.31
VARS-216ENST00000428445 SLC7A4O43246 635 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 THEGLP0DJG4 465 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 SLC2A3P11169 496 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 DGKAP23743 735 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 RTP5Q14D33 572 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 TTC39BQ5VTQ0 682 aaPredicted RBP16.97■□□□□ 0.31
VARS-216ENST00000428445 OLFML1Q6UWY5 402 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
VARS-216ENST00000428445 DSG4Q86SJ6 1040 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 OXR1Q8N573 874 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 ATP11CQ8NB49 1132 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 NRSN2Q9GZP1 204 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 TNKS2Q9H2K2 1166 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 PIGVQ9NUD9 493 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 ZFR2Q9UPR6 939 aaKnown RBP16.97■□□□□ 0.31
VARS-216ENST00000428445 CLCA2Q9UQC9 943 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 DMTF1Q9Y222 760 aa16.97■□□□□ 0.31
VARS-216ENST00000428445 PCDHB1Q9Y5F3 818 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms