RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MYOCOSA0A1B0GUC4 107 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TISP43B9A030 160 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KPNA4O00629 521 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 NDUFS2O75306 463 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CKMT2P17540 419 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ATF3P18847 181 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 JAK1P23458 1154 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 QARSP47897 775 aaKnown RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 IFITM2Q01629 132 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PDK2Q15119 407 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 BNC2Q6ZN30 1099 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 GALNT13Q8IUC8 556 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 UNC5BQ8IZJ1 945 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CNBD2Q96M20 576 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 EFHD1Q9BUP0 239 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CYP4F11Q9HBI6 524 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SAE1Q9UBE0 346 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 DNAJC16Q9Y2G8 782 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 AQP12BA6NM10 295 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 M0QX08 132 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 MYL3P08590 195 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ZNF76P36508 570 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 NSUN2Q08J23 767 aaKnown RBP eCLIP5.24□□□□□ -1.57
RIF1-203ENST00000428287 AQP12AQ8IXF9 295 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 KLHDC8BQ8IXV7 354 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PEX5LQ8IYB4 626 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 LSMEM2Q8N112 164 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PLD5Q8N7P1 536 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ZSWIM2Q8NEG5 633 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GSDMBQ8TAX9 411 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CCDC127Q96BQ5 260 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 FAM118BQ9BPY3 351 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GATA5Q9BWX5 397 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 SCUBE2Q9NQ36 999 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SMOXQ9NWM0 555 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GDAP2Q9NXN4 497 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CACNA2D2Q9NY47 1150 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ANKMY1Q9P2S6 941 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TMEM114B3SHH9 223 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PI4K2BG5E9Z4 385 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 MCF2LO15068 1137 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SNX4O95219 450 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 ALOX5P09917 674 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 SCNN1DP51172 638 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 MLLT10P55197 1068 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 PEX3P56589 373 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 GALNT1Q10472 559 aaPredicted RBP5.24□□□□□ -1.57
RIF1-203ENST00000428287 FSTL1Q12841 308 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 E2F2Q14209 437 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 IQSEC1Q6DN90 963 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 CLEC10AQ8IUN9 316 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TTC30BQ8N4P2 665 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 TTC9Q92623 222 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 RDH12Q96NR8 316 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 C11orf70Q9BRQ4 267 aa5.24□□□□□ -1.57
RIF1-203ENST00000428287 M6PRP20645 277 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 AXLP30530 894 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 LEPRP48357 1165 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 NAB1Q13506 487 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 PTK2BQ14289 1009 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 KRT80Q6KB66 452 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 UGT3A1Q6NUS8 523 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 HACD2Q6Y1H2 254 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 IGFN1Q86VF2 1251 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 FBXO11Q86XK2 927 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CLVS1Q8IUQ0 354 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 ARNTL2Q8WYA1 636 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 OR52B2Q96RD2 323 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CYP2S1Q96SQ9 504 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ADI1Q9BV57 179 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 FAM124BQ9H5Z6 455 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 TRNAU1APQ9NX07 287 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 TFCP2L1Q9NZI6 479 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TMEM181Q9P2C4 612 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CACNA1BQ00975 2339 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ROS1P08922 2347 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CNOT1A5YKK6 2376 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 G3V2L1 256 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 SPTLC1O15269 473 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ITGBL1O95965 494 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 NDUFB10O96000 172 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CFHP08603 1231 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CCDC159P0C7I6 412 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 STAT2P52630 851 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 YWHAZP63104 245 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 CUL2Q13617 745 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TTC23LQ6PF05 361 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 GMCL1P1Q8NEA9 526 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 MARVELD3Q96A59 401 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 WDR12Q9GZL7 423 aaKnown RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 NACA2Q9H009 215 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 ILKAPQ9H0C8 392 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 SMARCAD1Q9H4L7 1026 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 COPS7BQ9H9Q2 264 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 GPRC5CQ9NQ84 441 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TOPORSQ9NS56 1045 aaPredicted RBP5.23□□□□□ -1.57
RIF1-203ENST00000428287 ACTR3BQ9P1U1 418 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 CARD8Q9Y2G2 431 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 A3GALT2U3KPV4 340 aa5.23□□□□□ -1.57
RIF1-203ENST00000428287 TMX2-CTNND1H3BSU7 103 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms