RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HPS6Q86YV9 775 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLCZ1Q86YW0 608 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 RIOX2Q8IUF8 465 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC9A9Q8IVB4 645 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 HERC6Q8IVU3 1022 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCDC103Q8IW40 242 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADGRF2Q8IZF7 708 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CMTR1Q8N1G2 835 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF276Q8N554 614 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 DHRSXQ8N5I4 330 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 HIPK4Q8NE63 616 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SHCBP1Q8NEM2 672 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ABHD11Q8NFV4 315 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MCOLN3Q8TDD5 553 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM174Q8WUU8 243 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 DCAKDQ8WVC6 231 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFAP2CQ92754 450 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 DNAJC19Q96DA6 116 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMCO6Q96DC7 493 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MCRS1Q96EZ8 462 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 REXO5Q96IC2 774 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 METTL2AQ96IZ6 378 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC45A3Q96JT2 553 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 B3GALT6Q96L58 329 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CEP295NLQ96MC4 621 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 RIPOR3Q96MK2 946 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MTMR9Q96QG7 549 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CIB1Q99828 191 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF717Q9BY31 904 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC6A15Q9H2J7 730 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ARMC7Q9H6L4 198 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCSER2Q9H7U1 834 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ARMT1Q9H993 441 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 LGR6Q9HBX8 967 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GPBP1L1Q9HC44 474 aaPredicted RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCDH12Q9NPG4 1184 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 AKIP1Q9NQ31 210 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 HPS4Q9NQG7 708 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 GINM1Q9NU53 330 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 OLAHQ9NV23 265 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCDC59Q9P031 241 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRP2BPQ9P2M1 347 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MBD2Q9UBB5 411 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 NXF1Q9UBU9 619 aaKnown RBP5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ANAPC7Q9UJX3 599 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 COG5Q9UP83 839 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 RIC1Q4ADV7 1423 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 MYH11P35749 1972 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF804BA4D1E1 1349 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPATA31A1Q5TZJ5 1347 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPATA31A6Q5VVP1 1343 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPATA31A3Q5VYP0 1347 aa5.71□□□□□ -1.5
VTI1BP4-201ENST00000427516 RGPD8O14715 1765 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RGPD5Q99666 1765 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SCN11AQ9UI33 1791 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RNF103-CHMP3A0A140T963 221 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 A0A1W2PPM1 405 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 A0A1W2PQ72 361 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 HEATR9A2RTY3 570 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR5K3A6NET4 321 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AQP12BA6NM10 295 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZBBXA8MT70 800 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 UBE2Q2LH0YL09 131 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 H7C0C1 242 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SGK1O00141 431 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GPR25O00155 361 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCRL2O00421 344 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDK2AP1O14519 115 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TBX3O15119 743 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TP73O15350 636 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AKAP10O43572 662 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 EPN2O95208 641 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SNX4O95219 450 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAP3K6O95382 1288 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MED26O95402 600 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 WDPCPO95876 746 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 DLGAP3O95886 979 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CD4P01730 458 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GPIP06744 558 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 P4HBP07237 508 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 KRT19P08727 400 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ATF7P17544 494 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ATF6P18850 670 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CD9P21926 228 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GLDCP23378 1020 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GLRA2P23416 452 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 EEF1B2P24534 225 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ERP29P30040 261 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 IDUAP35475 653 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 KRT20P35900 424 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 DDOSTP39656 456 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CAPGP40121 348 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GP5P40197 560 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ARL1P40616 181 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CASP3P42574 277 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 IL12RB1P42701 662 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC1A6P48664 564 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CLK3P49761 638 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms