RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 RAPSNQ13702 412 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 RFX4Q33E94 735 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 FAM153CQ494X1 144 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 GLT6D1Q7Z4J2 308 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 DAW1Q8N136 415 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 ACTRT1Q8TDG2 376 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 APOPT1Q96IL0 206 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 YME1L1Q96TA2 773 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 GSDMCQ9BYG8 508 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 TRIT1Q9H3H1 467 aaKnown RBP12.73□□□□□ -0.37
HDLBP-214ENST00000427183 SHOC2Q9UQ13 582 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 GMPPBQ9Y5P6 360 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 STX16-NPEPL1H3BU86 382 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 STX16O14662 325 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 HAT1O14929 419 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 RGS14O43566 566 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 CLUP10909 449 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 RPL4P36578 427 aaKnown RBP12.73□□□□□ -0.37
HDLBP-214ENST00000427183 SLC25A3Q00325 362 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 TIMM50Q3ZCQ8 353 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 SAMD4BQ5PRF9 694 aaKnown RBP12.73□□□□□ -0.37
HDLBP-214ENST00000427183 IRGCQ6NXR0 463 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 ARHGAP36Q6ZRI8 547 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 ZNF571Q7Z3V5 609 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-214ENST00000427183 TRPV3Q8NET8 790 aa12.73□□□□□ -0.37
HDLBP-214ENST00000427183 CNOT7Q9UIV1 285 aaKnown RBP12.73□□□□□ -0.37
HDLBP-214ENST00000427183 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 PRODHO43272 600 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CKBP12277 381 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 EIF2S3P41091 472 aaKnown RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 BCAT1P54687 386 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 FOXO4P98177 505 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CCNG2Q16589 344 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 ADHFE1Q8IWW8 467 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 TSPAN14Q8NG11 270 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CCDC115Q96NT0 180 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CLN6Q9NWW5 311 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 ENTPD4Q9Y227 616 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 USP12O75317 370 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 OR5F1O95221 314 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 F9P00740 461 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 ARHGDIBP52566 201 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CDC42P60953 191 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 DENND5AQ6IQ26 1287 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 FAR1Q8WVX9 515 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 RMI1Q9H9A7 625 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 NKIRAS2Q9NYR9 191 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 A0A0G2JLW4 131 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 HIRAP54198 1017 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 PTPN5P54829 565 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 AP1S2P56377 157 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 MYL6P60660 151 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CDK16Q00536 496 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 SRSF11Q05519 484 aaKnown RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 GNA13Q14344 377 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CARTPTQ16568 116 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 DET1Q7L5Y6 550 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 BRSK2Q8IWQ3 736 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 DNAJB14Q8TBM8 379 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 AHCYL2Q96HN2 611 aaKnown RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 FAM50BQ9Y247 325 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 KRT33AO76009 404 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 STAG3L1P0CL83 205 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 MUTP22033 750 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 AMPD1P23109 780 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 GP5P40197 560 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 RPL21P46778 160 aaKnown RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 SPIDRQ14159 915 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 C5orf22Q49AR2 442 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 DNAJC1Q96KC8 554 aaKnown RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 MNTQ99583 582 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CDHR5Q9HBB8 845 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 NMRAL1Q9HBL8 299 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 EURLQ9NYK6 297 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 H7C4K7 107 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 PROSCO94903 275 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 RTN3O95197 1032 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 CASP5P51878 434 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 SGCGQ13326 291 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 ZNF846Q147U1 533 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 OR52L1Q8NGH7 329 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 MLPHQ9BV36 600 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-214ENST00000427183 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 RACGAP1Q9H0H5 632 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 DSN1Q9H410 356 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 TAS2R13Q9NYV9 303 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 GMEB1Q9Y692 573 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
HDLBP-214ENST00000427183 PIGNO95427 931 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms