RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SERPINB6P35237 376 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 CIPCQ9C0C6 399 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 TBC1D30Q9Y2I9 924 aa13.74□□□□□ -0.21
PRPF39-202ENST00000424478 WDR87Q6ZQQ6 2873 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
PRPF39-202ENST00000424478 PTGIRP43119 386 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 ARF5P84085 180 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 DR1Q01658 176 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 C6orf118Q5T5N4 469 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 AFMIDQ63HM1 303 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 MTSS1LQ765P7 747 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 ALG14Q96F25 216 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 SP110Q9HB58 689 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 RNF14Q9UBS8 474 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 VPS51Q9UID3 782 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 FCF1Q9Y324 198 aaKnown RBP13.73□□□□□ -0.21
PRPF39-202ENST00000424478 WASH4PA8MWX3 477 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 ZNF487B1APH4 448 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 PRRT4C9JH25 899 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 RNF103O00237 685 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 NFATC1O95644 943 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 ADH1CP00326 375 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 TCF3P15923 654 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 SERINC3Q13530 473 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 EMC10Q5UCC4 262 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 HEATR6Q6AI08 1181 aaKnown RBP13.73□□□□□ -0.21
PRPF39-202ENST00000424478 C8orf74Q6P047 294 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 KDELC2Q7Z4H8 507 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 VSIG1Q86XK7 387 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 GSPT2Q8IYD1 628 aaKnown RBP13.73□□□□□ -0.21
PRPF39-202ENST00000424478 ZBTB9Q96C00 473 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 QKIQ96PU8 341 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF39-202ENST00000424478 PIH1D1Q9NWS0 290 aaKnown RBP13.73□□□□□ -0.21
PRPF39-202ENST00000424478 DNAH14Q0VDD8 3507 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 MUSKO15146 869 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 OPRD1P41143 372 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 MAPKAPK2P49137 400 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 CLCN6P51797 869 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 WASHC5Q12768 1159 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 PDK1Q15118 436 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 CHST9Q7L1S5 443 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 JAMLQ86YT9 394 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 HTR3CQ8WXA8 447 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 GGA2Q9UJY4 613 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 OR51B4Q9Y5P0 310 aa13.73□□□□□ -0.21
PRPF39-202ENST00000424478 WASH3PC4AMC7 463 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 DGKGP49619 791 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 OXCT1P55809 520 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 PRKD1Q15139 912 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-202ENST00000424478 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 PITRM1Q5JRX3 1037 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 ZNF572Q7Z3I7 529 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-202ENST00000424478 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 TSEN2Q8NCE0 465 aaKnown RBP13.72□□□□□ -0.21
PRPF39-202ENST00000424478 FIBINQ8TAL6 211 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 PWWP2AQ96N64 755 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 TM6SF2Q9BZW4 377 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 CD320Q9NPF0 282 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 POLR3BQ9NW08 1133 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-202ENST00000424478 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 CHADO15335 359 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 CD160O95971 181 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 PEX11BO96011 259 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 GKP32189 559 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 NR2C2P49116 596 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 SEC13P55735 322 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 GAD2Q05329 585 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 CNTD1Q8N815 330 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 NKD2Q969F2 451 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-202ENST00000424478 TNKS2Q9H2K2 1166 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 OBP2AQ9NY56 170 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
PRPF39-202ENST00000424478 ILVBLA1L0T0 632 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ARHGAP42A6NI28 874 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 PPP1R12AO14974 1030 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ZBTB24O43167 697 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ECEL1O95672 775 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 KRT14P02533 472 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CHRNA3P32297 505 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 WASP42768 502 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 RGRP47804 291 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 NDST2P52849 883 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ITKQ08881 620 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 PDGFRLQ15198 375 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 TTC39BQ5VTQ0 682 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ADIPOR2Q86V24 386 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ZNF567Q8N184 647 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 ALLCQ8N6M5 410 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 C12orf50Q8NA57 414 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-202ENST00000424478 MAIP1Q8WWC4 291 aa13.71□□□□□ -0.21
PRPF39-202ENST00000424478 OTUB2Q96DC9 234 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms