RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 TMPRSS4Q9NRS4 437 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 PTTG2Q9NZH5 202 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 DCDC2Q9UHG0 476 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 TMCO1Q9UM00 188 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 IGKV6-21A0A0C4DH24 114 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 H3BSA7 217 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 AP1G1O43747 822 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 HOXD8P13378 290 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 ALOX15P16050 662 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 MPSTP25325 297 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 SDC4P31431 198 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 EFNA5P52803 228 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 CBLBQ13191 982 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 GOLGA7BQ2TAP0 167 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 HEATR6Q6AI08 1181 aaKnown RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 B3GNT6Q6ZMB0 384 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 CDKL3Q8IVW4 592 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 TP53INP2Q8IXH6 220 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 KCNN1Q92952 543 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 FCRL3Q96P31 734 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 KCNK16Q96T55 309 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 AGAP2Q99490 1192 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 PKP2Q99959 881 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 CDH19Q9H159 772 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 RPF1Q9H9Y2 349 aaKnown RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 LIN28AQ9H9Z2 209 aaKnown RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 PTPRHQ9HD43 1115 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 SNX15Q9NRS6 342 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 DTLQ9NZJ0 730 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 SEPT10Q9P0V9 454 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 DENRO43583 198 aaKnown RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 HCRTO43612 131 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 PEX1O43933 1283 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 ALDH1A2O94788 518 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 PENKP01210 267 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 JUNP05412 331 aaKnown RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 SEMA5AQ13591 1074 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 ITGA7Q13683 1181 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 FLOT2Q14254 428 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 PPP1R26Q5T8A7 1209 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 OLFML1Q6UWY5 402 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 DSELQ8IZU8 1212 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 DCLK2Q8N568 766 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 CCDC185Q8N715 623 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 BHLHE22Q8NFJ8 381 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 CXorf38Q8TB03 319 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 GRIN3AQ8TCU5 1115 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 LRGUKQ96M69 825 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 DNAAF2Q9NVR5 837 aaKnown RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 RIMS3Q9UJD0 308 aa14.63□□□□□ -0.07
MSH5-206ENST00000423982 TRIP12Q14669 1992 aaPredicted RBP14.63□□□□□ -0.07
MSH5-206ENST00000423982 MAGEB3O15480 346 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 CYP2C9P11712 490 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 CDK4P11802 303 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 ENO3P13929 434 aaPredicted RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 GOT1P17174 413 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 PROZP22891 400 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 GRK2P25098 689 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 PIK3R1P27986 724 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 IRF5Q13568 498 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 CEACAM7Q14002 265 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 MXD4Q14582 209 aaPredicted RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 STEAP4Q687X5 459 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 TTC30AQ86WT1 665 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 ZBTB8OSQ8IWT0 167 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 TDRD5Q8NAT2 981 aaKnown RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 COLGALT1Q8NBJ5 622 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 ITFG2Q969R8 447 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 RCN3Q96D15 328 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 RTKNQ9BST9 563 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 MRPL1Q9BYD6 325 aaKnown RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 CDHR5Q9HBB8 845 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 HESX1Q9UBX0 185 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 GOLGA8TH3BQL2 631 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 PDLIM1O00151 329 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 PAPSS1O43252 624 aaPredicted RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 ADAMTS4O75173 837 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 VDRP11473 427 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 SLC5A2P31639 672 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 GJA9P57773 515 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 HPCAP84074 193 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 SURF1Q15526 300 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 ZSCAN18Q8TBC5 510 aaPredicted RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 HPDLQ96IR7 371 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 CPB2Q96IY4 423 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 KLHL32Q96NJ5 620 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 KCTD15Q96SI1 283 aaPredicted RBP14.62□□□□□ -0.07
MSH5-206ENST00000423982 OSMRQ99650 979 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 CXCL16Q9H2A7 254 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 EPB41L1Q9H4G0 881 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 TCF7L2Q9NQB0 619 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 RNF19AQ9NV58 838 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 STK39Q9UEW8 545 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
MSH5-206ENST00000423982 G3V2L1 256 aa14.61□□□□□ -0.07
MSH5-206ENST00000423982 TMCC1O94876 653 aa14.61□□□□□ -0.07
MSH5-206ENST00000423982 CTSHP09668 335 aa14.61□□□□□ -0.07
MSH5-206ENST00000423982 PTPN1P18031 435 aaKnown RBP14.61□□□□□ -0.07
MSH5-206ENST00000423982 CNTFP26441 200 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms