RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RAD23AP54725 363 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 HPCAP84074 193 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF33AQ06730 810 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 TEAD2Q15562 447 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 DUSP6Q16828 381 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 UNQ9370/PRO34162Q6UXP9 181 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 UNQ6126/PRO20091Q6UXV3 157 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 ASB18Q6ZVZ8 466 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 P3H4Q92791 437 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 FAM163AQ96GL9 167 aaPredicted RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 MXRA8Q9BRK3 442 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 FDXACB1Q9BRP7 624 aaPredicted RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 TRIM4Q9C037 500 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 LACRTQ9GZZ8 138 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 CNOT10Q9H9A5 744 aaKnown RBP3.63□□□□□ -1.83
TOP2A-201ENST00000423485 PARVGQ9HBI0 331 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 HEBP1Q9NRV9 189 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 CDC23Q9UJX2 597 aa3.63□□□□□ -1.83
TOP2A-201ENST00000423485 DOCK9Q9BZ29 2069 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 NOTCH4Q99466 2003 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MCM3APO60318 1980 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SPECC1L-ADORA2AF8WAN1 911 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 CCRL2O00421 344 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 WISP1O95388 367 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GNA14O95837 355 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TSPAN12O95859 305 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 AHSGP02765 367 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SAT1P21673 171 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MAT2AP31153 395 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 EVCP57679 992 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DSC1Q08554 894 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DMPKQ09013 629 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 EXOC3L4Q17RC7 722 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DEPDC1Q5TB30 811 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 METTL16Q86W50 562 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ADGRF4Q8IZF3 695 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 KRT222Q8N1A0 295 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 NCSTNQ92542 709 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM143Q96AN5 459 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 IQCDQ96DY2 449 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 LENG8Q96PV6 779 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PUS3Q9BZE2 481 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 LRMDAQ9H2I8 198 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 A0A096LPK6 155 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TARSL2A2RTX5 802 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 C2CD4DB7Z1M9 353 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 I3L4J1 428 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MAPK13O15264 365 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 CHADO15335 359 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 NOL4O94818 638 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 FDPSP14324 419 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 CD58P19256 250 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TLX1P31314 330 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 HOXD12P35452 270 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 IGFALSP35858 605 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PXNP49023 591 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 HSD17B7P56937 341 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 RGS1Q08116 209 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SH3D19Q5HYK7 790 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 KAZNQ674X7 775 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 C16orf62Q7Z3J2 963 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GPR149Q86SP6 731 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GPIHBP1Q8IV16 184 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF653Q96CK0 615 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 RMND5BQ96G75 393 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 DMAP1Q9NPF5 467 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ZMIZ1Q9ULJ6 1067 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF148Q9UQR1 794 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 HYOU1Q9Y4L1 999 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 RBM47A0AV96 593 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 A8MUI8 341 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 H3BRJ5 948 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 NUDT14O95848 222 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 LCP1P13796 627 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 JUNDP17535 347 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ME2P23368 584 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SHMT1P34896 483 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 IL9RQ01113 521 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SCAPQ12770 1279 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MTAPQ13126 283 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 CTC1Q2NKJ3 1217 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 COL28A1Q2UY09 1125 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 KHDC1LQ5JSQ8 128 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 BSPRYQ5W0U4 402 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GTF2IRD2BQ6EKJ0 949 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ENPP7Q6UWV6 458 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SPNS3Q6ZMD2 512 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 GTF2IRD2Q86UP8 949 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 PTRH1Q86Y79 214 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 RELL1Q8IUW5 271 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 C3orf56Q8N813 242 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 JPH3Q8WXH2 748 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TRIM11Q96F44 468 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 SMARCD1Q96GM5 515 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 MYO19Q96H55 970 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 TUBGCP5Q96RT8 1024 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 NOL6Q9H6R4 1146 aaKnown RBP3.62□□□□□ -1.83
TOP2A-201ENST00000423485 CAPN10Q9HC96 672 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 ERVK-5Q9HDB9 667 aa3.62□□□□□ -1.83
TOP2A-201ENST00000423485 HOMER3Q9NSC5 361 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms