RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ROPN1Q9HAT0 212 aaPredicted RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 ZFP14Q9HCL3 533 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 UBP1Q9NZI7 540 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CALCOCO1Q9P1Z2 691 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 C2orf78A6NCI8 922 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CDH16O75309 829 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 TTC4O95801 387 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NFKB1P19838 968 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 PSMB4P28070 264 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 HSD17B3P37058 310 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 MAPK8P45983 427 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NPY2RP49146 381 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NUMBP49757 651 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 SULT2A1Q06520 285 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 ZNF33AQ06730 810 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 MTM1Q13496 603 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 RAB6CQ53S08 254 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 SETD3Q86TU7 594 aaPredicted RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 FBXO36Q8NEA4 188 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CSGALNACT1Q8TDX6 532 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 AENQ8WTP8 325 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 RAB6CQ9H0N0 254 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 TMEM30AQ9NV96 361 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 PPARGC1AQ9UBK2 798 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 HCFC2Q9Y5Z7 792 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NEDD8-MDP1E9PL57 170 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 STC2O76061 302 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 IGSF6O95976 241 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 FYNP06241 537 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 HOXB8P17481 243 aaPredicted RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 RPS24P62847 133 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 IL10RBQ08334 325 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 PPIDQ08752 370 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 OASLQ15646 514 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 HHATQ5VTY9 493 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NETO2Q8NC67 525 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 FICDQ9BVA6 458 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 SLC39A8Q9C0K1 460 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CDC42EP4Q9H3Q1 356 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 TMEM248Q9NWD8 314 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 DUS2Q9NX74 493 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 PLK2Q9NYY3 685 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 FNDC3AQ9Y2H6 1198 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 E2F8A0AVK6 867 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 ILVBLA1L0T0 632 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 NEMP1O14524 444 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 CLASP2O75122 1294 aaKnown RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 RNF40O75150 1001 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 GABBR2O75899 941 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 HOXA9P31269 272 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 CHST9Q7L1S5 443 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 TMC3Q7Z5M5 1100 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 SDCCAG8Q86SQ7 713 aaPredicted RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 PRUNE1Q86TP1 453 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 GANCQ8TET4 914 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 AZIN2Q96A70 460 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 E2F7Q96AV8 911 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 OTUB2Q96DC9 234 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 VPS39Q96JC1 886 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 CRISPLD1Q9H336 500 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 VPS45Q9NRW7 570 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 FAM50BQ9Y247 325 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 RPS6KL1Q9Y6S9 549 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 GOLGA6L7A0A1B0GV03 622 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 FAM72CH0Y354 149 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 LEFTY2O00292 366 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 UGP2Q16851 508 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 SPDYCQ5MJ68 293 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 MFSD4BQ5TF39 518 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 FAM72AQ5TYM5 149 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 FAM72DQ6L9T8 149 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 FAM72BQ86X60 149 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 CIR1Q86X95 450 aaPredicted RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 CALML6Q8TD86 181 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 ZNF669Q96BR6 464 aaPredicted RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 HMCESQ96FZ2 354 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 APOL2Q9BQE5 337 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 NSRP1Q9H0G5 558 aaKnown RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 GLOD4Q9HC38 313 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 TLK1Q9UKI8 766 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 F8W8V4 182 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 H0YGN5 161 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 SNRPD1P62314 119 aaKnown RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 GAD2Q05329 585 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 CCDC15Q0P6D6 951 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 GALNT2Q10471 571 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 CHRDL2Q6WN34 429 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 ARID3BQ8IVW6 561 aaPredicted RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 CPA6Q8N4T0 437 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 C12orf76Q8N812 135 aaPredicted RBP7.55□□□□□ -1.2
BDNF-209ENST00000420794 GSDMBQ8TAX9 411 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 SEMA4AQ9H3S1 761 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 WDR70Q9NW82 654 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms