RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 USP18Q9UMW8 372 aa10.79□□□□□ -0.68
RFC1-203ENST00000418436 SPAG17Q6Q759 2223 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 CEP192Q8TEP8 1941 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 USP34Q70CQ2 3546 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 A0A0D9SEW6 157 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 PRR23AA6NEV1 266 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 WASH4PA8MWX3 477 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 CFAP99D6REC4 459 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 MYO1FO00160 1098 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 RPP40O75818 363 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 LMNAP02545 664 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 EPHX1P07099 455 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 RHOCP08134 193 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 HLA-EP13747 358 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 IL1R2P27930 398 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 HTR7P34969 479 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 MAPKAPK2P49137 400 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 COPAP53621 1224 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 ST8SIA6P61647 398 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 TCEAL1Q15170 157 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 CA9Q16790 459 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 HNRNPA1L2Q32P51 320 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 FNDC3BQ53EP0 1204 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 DAB2IPQ5VWQ8 1189 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 CCDC170Q8IYT3 715 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 ZNF564Q8TBZ8 553 aaPredicted RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 ZC3H10Q96K80 434 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 BTBD6Q96KE9 485 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 MRGPRX1Q96LB2 322 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 SNRNP25Q9BV90 132 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 TPSD1Q9BZJ3 242 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 MKRN2Q9H000 416 aaKnown RBP10.78□□□□□ -0.68
RFC1-203ENST00000418436 PRSS16Q9NQE7 514 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 NDFIP2Q9NV92 336 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 EVA1BQ9NVM1 165 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 IMPACTQ9P2X3 320 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 PCSK1NQ9UHG2 260 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 SLCO3A1Q9UIG8 710 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 VPS28Q9UK41 221 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 AP4E1Q9UPM8 1137 aa10.78□□□□□ -0.68
RFC1-203ENST00000418436 CXorf51AA0A1B0GTR3 108 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 TTC24A2A3L6 582 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 ATP9BO43861 1147 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 SYNCRIPO60506 623 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 ZMPSTE24O75844 475 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 MTA2O94776 668 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 AVPP01185 164 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 TCF4P15884 667 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 EPHB2P29323 1055 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 P2RY2P41231 377 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 HCAR3P49019 387 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 STK19P49842 368 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 ZNF135P52742 658 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 KRT83P78385 493 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 SLC25A11Q02978 314 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 GNA12Q03113 381 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 SIM2Q14190 667 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 MAP7D1Q3KQU3 841 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 USP39Q53GS9 565 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 BOLA3Q53S33 107 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 RWDD4Q6NW29 188 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 ASCL5Q7RTU5 278 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 TMPRSS6Q8IU80 811 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 TMTC1Q8IUR5 882 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 ZNF366Q8N895 744 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 RTL3Q8N8U3 475 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 DCAF4L2Q8NA75 395 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 OR7D4Q8NG98 312 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 OR2T3Q8NH03 318 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 SNIP1Q8TAD8 396 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 FRS2Q8WU20 508 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 RPL10LQ96L21 214 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 C2orf49Q9BVC5 232 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 ACE2Q9BYF1 805 aaPredicted RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 MUC3BQ9H195 1237 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 DHX35Q9H5Z1 703 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 FBRSQ9HAH7 460 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 PRDM16Q9HAZ2 1276 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 GPATCH2LQ9NWQ4 482 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 BCCIPQ9P287 314 aaKnown RBP eCLIP10.77□□□□□ -0.69
RFC1-203ENST00000418436 CTTNBP2NLQ9P2B4 639 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 LCMT1Q9UIC8 334 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 SMG5Q9UPR3 1016 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 HS3ST2Q9Y278 367 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 NUP205Q92621 2012 aa10.77□□□□□ -0.69
RFC1-203ENST00000418436 TNRC6BQ9UPQ9 1833 aaKnown RBP10.77□□□□□ -0.69
RFC1-203ENST00000418436 THADAQ6YHU6 1953 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 TTC34A8MYJ7 566 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 FGF10O15520 208 aaPredicted RBP10.76□□□□□ -0.69
RFC1-203ENST00000418436 CREB3O43889 395 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 SNAP91O60641 907 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 SIN3BO75182 1162 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 PROSCO94903 275 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 RARAP10276 462 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 ETFBP38117 255 aa10.76□□□□□ -0.69
RFC1-203ENST00000418436 NNMTP40261 264 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms