RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 SYTL1Q8IYJ3 562 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 PYROXD2Q8N2H3 581 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 SLC4A11Q8NBS3 891 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 MECRQ9BV79 373 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 IL22Q9GZX6 179 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ALG9Q9H6U8 611 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 SIX2Q9NPC8 291 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.44□□□□□ -0.26
BDNF-208ENST00000418212 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 MSCO60682 206 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 CABYRO75952 493 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 TAF10Q12962 218 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 KRT72Q14CN4 511 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 PFKFB4Q16877 469 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ATP6AP1LQ52LC2 224 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ISLR2Q6UXK2 745 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 TRMT11Q7Z4G4 463 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 XYLT1Q86Y38 959 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 EIF1ADQ8N9N8 165 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 BRI3BPQ8WY22 251 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 CPNE1Q99829 537 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 EBNA1BP2Q99848 306 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 LRRC4CQ9HCJ2 640 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ZMYM5Q9UJ78 669 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 NOCTQ9UK39 431 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 PROCP04070 461 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 CHRNB2P17787 502 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ABL2P42684 1182 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 PRIM2P49643 509 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 MBTD1Q05BQ5 628 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 WLSQ5T9L3 541 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 MON1BQ7L1V2 547 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 PHACTR4Q8IZ21 702 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 CKAP2Q8WWK9 683 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ATXN2LQ8WWM7 1075 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 CSPG4P5Q96PW8 444 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 CCDC134Q9H6E4 229 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 TAGLN3Q9UI15 199 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 EIF3LQ9Y262 564 aaKnown RBP13.44□□□□□ -0.26
BDNF-208ENST00000418212 GIT1Q9Y2X7 761 aa13.44□□□□□ -0.26
BDNF-208ENST00000418212 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 HNRNPCP07910 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
BDNF-208ENST00000418212 VHLP40337 213 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 JAM2P57087 298 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 SH3PXD2AQ5TCZ1 1133 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 ZNF516Q92618 1163 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 OXNAD1Q96HP4 312 aaPredicted RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 ZNF558Q96NG5 402 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 ACSS2Q9NR19 701 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 KCPQ6ZWJ8 1503 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 FZD9O00144 591 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 SLC2A4P14672 509 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 ZNF23P17027 643 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 ZNF7P17097 686 aaPredicted RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 NRLP54845 237 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 CERCAMQ5T4B2 595 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 ARMC12Q5T9G4 340 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 CACHD1Q5VU97 1274 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 SNX32Q86XE0 403 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 MREGQ8N565 214 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 EMILIN2Q9BXX0 1053 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 MYLK2Q9H1R3 596 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 ACSS3Q9H6R3 686 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 DCLRE1BQ9H816 532 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 PARVBQ9HBI1 364 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 UXTQ9UBK9 157 aaPredicted RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 TBL3Q12788 808 aaKnown RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 SLC25A52Q3SY17 297 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 IYDQ6PHW0 289 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 DCLRE1AQ6PJP8 1040 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 CYP2R1Q6VVX0 501 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
BDNF-208ENST00000418212 PLD5Q8N7P1 536 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 CATSPER1Q8NEC5 780 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 OR52K2Q8NGK3 314 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 C12orf42Q96LP6 360 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 LHX5Q9H2C1 402 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 DTNAQ9Y4J8 743 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 PCDHB9Q9Y5E1 797 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
BDNF-208ENST00000418212 KLHL33A6NCF5 533 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 CFHP08603 1231 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 PBX3P40426 434 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 AASDHQ4L235 1098 aaPredicted RBP13.42□□□□□ -0.26
BDNF-208ENST00000418212 SCIMPQ6UWF3 145 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 FNDC5Q8NAU1 212 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
BDNF-208ENST00000418212 MED8Q96G25 268 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms